RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 TATDN1Q6P1N9 297 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 FASTKD5Q7L8L6 764 aaKnown RBP17.1■□□□□ 0.33
USE1-210ENST00000601662 PRRT2Q7Z6L0 340 aaPredicted RBP17.1■□□□□ 0.33
USE1-210ENST00000601662 ANKRD23Q86SG2 305 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 SLC44A5Q8NCS7 719 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 AS3MTQ9HBK9 375 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 NAV1Q8NEY1 1877 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
USE1-210ENST00000601662 ECM2O94769 699 aaPredicted RBP17.09■□□□□ 0.33
USE1-210ENST00000601662 CYP21A2P08686 494 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 PSMA5P28066 241 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 SHMT1P34896 483 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 HMGCS2P54868 508 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 PPARAQ07869 468 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 RAB3GAP1Q15042 981 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 ABCB5Q2M3G0 1257 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 C12orf60Q5U649 245 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 MCOLN1Q9GZU1 580 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
USE1-210ENST00000601662 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 CABP5Q9NP86 173 aa17.09■□□□□ 0.33
USE1-210ENST00000601662 BAZ2AQ9UIF9 1905 aaKnown RBP17.08■□□□□ 0.33
USE1-210ENST00000601662 CYP2C8P10632 490 aa17.08■□□□□ 0.32
USE1-210ENST00000601662 NT5C2P49902 561 aa17.08■□□□□ 0.32
USE1-210ENST00000601662 SP3Q02447 781 aa17.08■□□□□ 0.32
USE1-210ENST00000601662 GABPAQ06546 454 aa17.08■□□□□ 0.32
USE1-210ENST00000601662 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.32
USE1-210ENST00000601662 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
USE1-210ENST00000601662 HMGB1P09429 215 aaKnown RBP17.07■□□□□ 0.32
USE1-210ENST00000601662 PDE4BQ07343 736 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 TRDNQ13061 729 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 MTMR2Q13614 643 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
USE1-210ENST00000601662 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 CD99L2Q8TCZ2 262 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 WDR18Q9BV38 432 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 CNNM2Q9H8M5 875 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 ZCCHC17Q9NP64 241 aaKnown RBP17.07■□□□□ 0.32
USE1-210ENST00000601662 GINM1Q9NU53 330 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 ATAD5Q96QE3 1844 aa17.07■□□□□ 0.32
USE1-210ENST00000601662 TLR2O60603 784 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 CDK8P49336 464 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 HAND2P61296 217 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
USE1-210ENST00000601662 TREML2Q5T2D2 321 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 FEZ1Q99689 392 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 SWAP70Q9UH65 585 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 LAMB1P07942 1786 aa17.06■□□□□ 0.32
USE1-210ENST00000601662 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 USP17L10C9JJH3 530 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 E7EWF7 191 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 SEPT2Q15019 361 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 ERO1AQ96HE7 468 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 ABHD8Q96I13 439 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 PARK7Q99497 189 aaKnown RBP17.05■□□□□ 0.32
USE1-210ENST00000601662 KRT23Q9C075 422 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 AGTPBP1Q9UPW5 1226 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 TRIM17Q9Y577 477 aa17.05■□□□□ 0.32
USE1-210ENST00000601662 FGRP09769 529 aa17.04■□□□□ 0.32
USE1-210ENST00000601662 AKR1B1P15121 316 aa17.04■□□□□ 0.32
USE1-210ENST00000601662 BACE1P56817 501 aa17.04■□□□□ 0.32
USE1-210ENST00000601662 CTDSPL2Q05D32 466 aa17.04■□□□□ 0.32
USE1-210ENST00000601662 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
USE1-210ENST00000601662 ACER1Q8TDN7 264 aa17.04■□□□□ 0.32
USE1-210ENST00000601662 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
USE1-210ENST00000601662 C19orf81C9J6K1 198 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 GUCY1A2P33402 732 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 RABEP1Q15276 862 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 C17orf99Q6UX52 265 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 C16orf86Q6ZW13 317 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 PROCA1Q8NCQ7 364 aaPredicted RBP17.03■□□□□ 0.32
USE1-210ENST00000601662 SMCR8Q8TEV9 937 aaPredicted RBP17.03■□□□□ 0.32
USE1-210ENST00000601662 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
USE1-210ENST00000601662 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
USE1-210ENST00000601662 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 CCDC85CA6NKD9 419 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 ORC4O43929 436 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 OSBPP22059 807 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 KIF22Q14807 665 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 BLOC1S2Q6QNY1 142 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 USP17L2Q6R6M4 530 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
USE1-210ENST00000601662 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
USE1-210ENST00000601662 ESR2Q92731 530 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms