RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZAP70P43403 619 aa20.53■□□□□ 0.88
USE1-208ENST00000600970 CCNA1P78396 465 aa20.53■□□□□ 0.88
USE1-208ENST00000600970 USP17L24Q0WX57 530 aa20.53■□□□□ 0.88
USE1-208ENST00000600970 MFSD14CQ5VZR4 134 aa20.53■□□□□ 0.88
USE1-208ENST00000600970 PIH1D3Q9NQM4 214 aaKnown RBP20.53■□□□□ 0.88
USE1-208ENST00000600970 IGSF3O75054 1194 aa20.52■□□□□ 0.88
USE1-208ENST00000600970 GLRX3O76003 335 aaKnown RBP20.52■□□□□ 0.88
USE1-208ENST00000600970 PTPREP23469 700 aa20.52■□□□□ 0.88
USE1-208ENST00000600970 FAM109BQ6ICB4 259 aaPredicted RBP20.52■□□□□ 0.88
USE1-208ENST00000600970 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.88
USE1-208ENST00000600970 CATSPERGQ6ZRH7 1159 aa20.52■□□□□ 0.88
USE1-208ENST00000600970 ZNF512BQ96KM6 892 aaPredicted RBP20.52■□□□□ 0.88
USE1-208ENST00000600970 DDX20Q9UHI6 824 aaKnown RBP20.52■□□□□ 0.88
USE1-208ENST00000600970 LTBP2Q14767 1821 aa20.51■□□□□ 0.87
USE1-208ENST00000600970 SLC15A5A6NIM6 579 aa20.51■□□□□ 0.87
USE1-208ENST00000600970 CYP7A1P22680 504 aa20.51■□□□□ 0.87
USE1-208ENST00000600970 WDR78Q5VTH9 848 aa20.51■□□□□ 0.87
USE1-208ENST00000600970 GUCD1Q96NT3 240 aa20.51■□□□□ 0.87
USE1-208ENST00000600970 FEZ1Q99689 392 aa20.51■□□□□ 0.87
USE1-208ENST00000600970 LBHD1Q9BQE6 289 aaPredicted RBP20.51■□□□□ 0.87
USE1-208ENST00000600970 COL25A1Q9BXS0 654 aaPredicted RBP20.51■□□□□ 0.87
USE1-208ENST00000600970 IPO8O15397 1037 aaKnown RBP20.5■□□□□ 0.87
USE1-208ENST00000600970 CNGA1P29973 690 aa20.5■□□□□ 0.87
USE1-208ENST00000600970 USP14P54578 494 aa20.5■□□□□ 0.87
USE1-208ENST00000600970 POLA2Q14181 598 aa20.5■□□□□ 0.87
USE1-208ENST00000600970 NPLOC4Q8TAT6 608 aa20.5■□□□□ 0.87
USE1-208ENST00000600970 LPAR1Q92633 364 aa20.5■□□□□ 0.87
USE1-208ENST00000600970 BTBD7Q9P203 1132 aa20.5■□□□□ 0.87
USE1-208ENST00000600970 MSCO60682 206 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 HOXC6P09630 235 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 ATN1P54259 1190 aaPredicted RBP20.49■□□□□ 0.87
USE1-208ENST00000600970 ATP2B2Q01814 1243 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 GRB14Q14449 540 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 LBX2Q6XYB7 198 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.49■□□□□ 0.87
USE1-208ENST00000600970 MIGA1Q8NAN2 632 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 ACER1Q8TDN7 264 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 CLUAP1Q96AJ1 413 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 KIAA1683Q9H0B3 1180 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 SERPINB13Q9UIV8 391 aa20.49■□□□□ 0.87
USE1-208ENST00000600970 VCAM1P19320 739 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 USP5P45974 858 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 OS9Q13438 667 aaPredicted RBP20.48■□□□□ 0.87
USE1-208ENST00000600970 CERKLQ49MI3 558 aaPredicted RBP20.48■□□□□ 0.87
USE1-208ENST00000600970 TRPV1Q8NER1 839 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 SSH3Q8TE77 659 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 FRAT1Q92837 279 aaPredicted RBP20.48■□□□□ 0.87
USE1-208ENST00000600970 FAM161BQ96MY7 647 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 EHD4Q9H223 541 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 RLFQ13129 1914 aa20.48■□□□□ 0.87
USE1-208ENST00000600970 LAMA2P24043 3122 aaKnown RBP20.48■□□□□ 0.87
USE1-208ENST00000600970 DNM1LO00429 736 aa20.47■□□□□ 0.87
USE1-208ENST00000600970 BCAR3O75815 825 aa20.47■□□□□ 0.87
USE1-208ENST00000600970 CYP2C19P33261 490 aa20.47■□□□□ 0.87
USE1-208ENST00000600970 RTP1P59025 263 aa20.47■□□□□ 0.87
USE1-208ENST00000600970 TLR7Q9NYK1 1049 aaKnown RBP20.47■□□□□ 0.87
USE1-208ENST00000600970 DBNLQ9UJU6 430 aaKnown RBP20.47■□□□□ 0.87
USE1-208ENST00000600970 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
USE1-208ENST00000600970 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
USE1-208ENST00000600970 IDH1O75874 414 aaKnown RBP20.46■□□□□ 0.87
USE1-208ENST00000600970 IGHA2P01877 340 aa20.46■□□□□ 0.87
USE1-208ENST00000600970 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
USE1-208ENST00000600970 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
USE1-208ENST00000600970 RPAP3Q9H6T3 665 aaPredicted RBP20.46■□□□□ 0.87
USE1-208ENST00000600970 PRKAG2Q9UGJ0 569 aa20.46■□□□□ 0.87
USE1-208ENST00000600970 ZNF236Q9UL36 1845 aa20.46■□□□□ 0.87
USE1-208ENST00000600970 CYBAP13498 195 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 TTC6Q86TZ1 520 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 CERS3Q8IU89 383 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 TMEM57Q8N5G2 664 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 MAGEB6Q8N7X4 407 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 CCDC8Q9H0W5 538 aaPredicted RBP20.45■□□□□ 0.86
USE1-208ENST00000600970 CABP5Q9NP86 173 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 EYSQ5T1H1 3165 aa20.45■□□□□ 0.86
USE1-208ENST00000600970 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
USE1-208ENST00000600970 SHMT1P34896 483 aa20.44■□□□□ 0.86
USE1-208ENST00000600970 PLCD1P51178 756 aa20.44■□□□□ 0.86
USE1-208ENST00000600970 GJC2Q5T442 439 aaPredicted RBP20.44■□□□□ 0.86
USE1-208ENST00000600970 ZNF697Q5TEC3 545 aa20.44■□□□□ 0.86
USE1-208ENST00000600970 ATP11BQ9Y2G3 1177 aa20.44■□□□□ 0.86
USE1-208ENST00000600970 SLC39A5Q6ZMH5 540 aa20.43■□□□□ 0.86
USE1-208ENST00000600970 DPP9Q86TI2 863 aa20.43■□□□□ 0.86
USE1-208ENST00000600970 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
USE1-208ENST00000600970 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
USE1-208ENST00000600970 NAV1Q8NEY1 1877 aa20.43■□□□□ 0.86
USE1-208ENST00000600970 A0A0G2JMZ2 1700 aa20.42■□□□□ 0.86
USE1-208ENST00000600970 SHHQ15465 462 aa20.42■□□□□ 0.86
USE1-208ENST00000600970 OLFML2BQ68BL8 750 aa20.42■□□□□ 0.86
USE1-208ENST00000600970 ARRDC4Q8NCT1 418 aa20.42■□□□□ 0.86
USE1-208ENST00000600970 EAF2Q96CJ1 260 aaPredicted RBP20.42■□□□□ 0.86
USE1-208ENST00000600970 MOV10L1Q9BXT6 1211 aaKnown RBP20.42■□□□□ 0.86
USE1-208ENST00000600970 STRNO43815 780 aa20.41■□□□□ 0.86
USE1-208ENST00000600970 ADORA2AP29274 412 aa20.41■□□□□ 0.86
USE1-208ENST00000600970 SEPT2Q15019 361 aa20.41■□□□□ 0.86
USE1-208ENST00000600970 ANO1Q5XXA6 986 aa20.41■□□□□ 0.86
USE1-208ENST00000600970 C1orf115Q9H7X2 142 aa20.41■□□□□ 0.86
USE1-208ENST00000600970 A0A1W2PRG0 241 aa20.4■□□□□ 0.86
USE1-208ENST00000600970 KBTBD13C9JR72 458 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms