RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 RASAL3Q86YV0 1011 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 REM2Q8IYK8 340 aaPredicted RBP19.7■□□□□ 0.74
USHBP1-210ENST00000600286 ZNF280CQ8ND82 737 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 FEZ1Q99689 392 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 INCENPQ9NQS7 918 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 DDX60LQ5H9U9 1706 aaKnown RBP19.7■□□□□ 0.74
USHBP1-210ENST00000600286 INHBEP58166 350 aa19.69■□□□□ 0.74
USHBP1-210ENST00000600286 ICA1Q05084 483 aa19.69■□□□□ 0.74
USHBP1-210ENST00000600286 SNAPC2Q13487 334 aa19.69■□□□□ 0.74
USHBP1-210ENST00000600286 SART3Q15020 963 aaKnown RBP19.69■□□□□ 0.74
USHBP1-210ENST00000600286 WDR18Q9BV38 432 aa19.69■□□□□ 0.74
USHBP1-210ENST00000600286 LAMB1P07942 1786 aa19.69■□□□□ 0.74
USHBP1-210ENST00000600286 ERICH2A1L162 156 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 MANSC4A6NHS7 340 aaPredicted RBP19.68■□□□□ 0.74
USHBP1-210ENST00000600286 C19orf81C9J6K1 198 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 USP17L10C9JJH3 530 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 KDM4AO75164 1064 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
USHBP1-210ENST00000600286 CETPP11597 493 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 PSMA5P28066 241 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 USP14P54578 494 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 SREBF2Q12772 1141 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 MKRN3Q13064 507 aaKnown RBP19.68■□□□□ 0.74
USHBP1-210ENST00000600286 SPP2Q13103 211 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 TSGA10IPQ3SY00 556 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 UBAC1Q9BSL1 405 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 NBPF3Q9H094 633 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 TMOD4Q9NZQ9 345 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 AFG3L2Q9Y4W6 797 aa19.68■□□□□ 0.74
USHBP1-210ENST00000600286 TRIM75PA6NK02 468 aa19.67■□□□□ 0.74
USHBP1-210ENST00000600286 B4E1Z4 1266 aa19.67■□□□□ 0.74
USHBP1-210ENST00000600286 IRF6O14896 467 aa19.67■□□□□ 0.74
USHBP1-210ENST00000600286 TTLL1O95922 423 aa19.67■□□□□ 0.74
USHBP1-210ENST00000600286 OTUD7BQ6GQQ9 843 aa19.67■□□□□ 0.74
USHBP1-210ENST00000600286 FASTKD5Q7L8L6 764 aaKnown RBP19.67■□□□□ 0.74
USHBP1-210ENST00000600286 TCP11L1Q9NUJ3 509 aa19.67■□□□□ 0.74
USHBP1-210ENST00000600286 MCM5P33992 734 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 TTC14Q96N46 770 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 NEK1Q96PY6 1258 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 MTMR4Q9NYA4 1195 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 ZSWIM5Q9P217 1185 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 NYAP2Q9P242 653 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 CLIP2Q9UDT6 1046 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 STX8Q9UNK0 236 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 NEDD4P46934 1319 aa19.66■□□□□ 0.74
USHBP1-210ENST00000600286 CA12O43570 354 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 CAPN15O75808 1086 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 BACE1P56817 501 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 JAG1P78504 1218 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 USP17L2Q6R6M4 530 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 KCNB2Q92953 911 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 CEP95Q96GE4 821 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 KCNH4Q9UQ05 1017 aa19.65■□□□□ 0.74
USHBP1-210ENST00000600286 EEF2P13639 858 aaKnown RBP19.64■□□□□ 0.73
USHBP1-210ENST00000600286 GUCY1A2P33402 732 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 ANAPC15P60006 121 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 KIF23Q02241 960 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-210ENST00000600286 CCDC84Q86UT8 332 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-210ENST00000600286 ZSCAN10Q96SZ4 725 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-210ENST00000600286 GOPCQ9HD26 462 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-210ENST00000600286 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 SNX14Q9Y5W7 946 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 TACC3Q9Y6A5 838 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 SIPA1L1O43166 1804 aa19.64■□□□□ 0.73
USHBP1-210ENST00000600286 PLIN4Q96Q06 1357 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 CCL15-CCL14A0A0B4J2E2 113 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 IFIT3O14879 490 aaKnown RBP19.63■□□□□ 0.73
USHBP1-210ENST00000600286 RAD21O60216 631 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 SEC24BO95487 1268 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 GJA5P36382 358 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 FGD1P98174 961 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 PABPC4Q13310 644 aaKnown RBP eCLIP19.63■□□□□ 0.73
USHBP1-210ENST00000600286 CCL15Q16663 113 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 SHROOM1Q2M3G4 852 aaPredicted RBP19.63■□□□□ 0.73
USHBP1-210ENST00000600286 GADL1Q6ZQY3 521 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 DGKHQ86XP1 1220 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 MTA3Q9BTC8 594 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 KIAA1683Q9H0B3 1180 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 TMX2Q9Y320 296 aa19.63■□□□□ 0.73
USHBP1-210ENST00000600286 IGKV6D-41A0A0C4DH26 115 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 A0A0G2JLL6 359 aaPredicted RBP19.62■□□□□ 0.73
USHBP1-210ENST00000600286 MTMR2Q13614 643 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 BLOC1S2Q6QNY1 142 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 STOX1Q6ZVD7 989 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 PRRT2Q7Z6L0 340 aaPredicted RBP19.62■□□□□ 0.73
USHBP1-210ENST00000600286 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 TMTC2Q8N394 836 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 MKL1Q969V6 931 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 JAKMIP1Q96N16 626 aaKnown RBP19.62■□□□□ 0.73
USHBP1-210ENST00000600286 BEGAINQ9BUH8 593 aa19.62■□□□□ 0.73
USHBP1-210ENST00000600286 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.62■□□□□ 0.73
USHBP1-210ENST00000600286 PRC1O43663 620 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 TOP1P11387 765 aaKnown RBP19.61■□□□□ 0.73
USHBP1-210ENST00000600286 HMGCS2P54868 508 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 ZYXQ15942 572 aaKnown RBP19.61■□□□□ 0.73
USHBP1-210ENST00000600286 SH3D19Q5HYK7 790 aa19.61■□□□□ 0.73
USHBP1-210ENST00000600286 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms