RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 ANKLE1Q8NAG6 615 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 C11orf49Q9H6J7 331 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 ZBTB40Q9NUA8 1239 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 PLCD1P51178 756 aa16.66■□□□□ 0.26
IRF3-225ENST00000600022 TATDN1Q6P1N9 297 aa16.66■□□□□ 0.26
IRF3-225ENST00000600022 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
IRF3-225ENST00000600022 FLRT1Q9NZU1 646 aa16.66■□□□□ 0.26
IRF3-225ENST00000600022 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
IRF3-225ENST00000600022 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
IRF3-225ENST00000600022 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
IRF3-225ENST00000600022 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
IRF3-225ENST00000600022 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
IRF3-225ENST00000600022 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
IRF3-225ENST00000600022 FOCADQ5VW36 1801 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 A0A1W2PPC1 479 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 HLA-DOAP06340 250 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 COL6A1P12109 1028 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 CAPN2P17655 700 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 MAPK4P31152 587 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 BMP8BP34820 402 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 USP5P45974 858 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 Q7L0L9 218 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 BTBD7Q9P203 1132 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 MAST2Q6P0Q8 1798 aa16.64■□□□□ 0.25
IRF3-225ENST00000600022 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
IRF3-225ENST00000600022 SHMT1P34896 483 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 LRRC26Q2I0M4 334 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 RIOK1Q9BRS2 568 aaKnown RBP16.63■□□□□ 0.25
IRF3-225ENST00000600022 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 SERPINB13Q9UIV8 391 aa16.63■□□□□ 0.25
IRF3-225ENST00000600022 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 CERKLQ49MI3 558 aaPredicted RBP16.62■□□□□ 0.25
IRF3-225ENST00000600022 AACSQ86V21 672 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
IRF3-225ENST00000600022 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 SOCS4Q8WXH5 440 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
IRF3-225ENST00000600022 A0A1W2PRG0 241 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 VCAM1P19320 739 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 RGS2P41220 211 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 ABCB5Q2M3G0 1257 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 KIAA1755Q5JYT7 1200 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 WDR78Q5VTH9 848 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 NPLOC4Q8TAT6 608 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
IRF3-225ENST00000600022 FEZ1Q99689 392 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 BCL11AQ9H165 835 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 RABGAP1Q9Y3P9 1069 aa16.61■□□□□ 0.25
IRF3-225ENST00000600022 MYH1P12882 1939 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 UNC80Q8N2C7 3258 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 CYP2D6P10635 497 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 PTPREP23469 700 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 MAP2K5Q13163 448 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 SEPT2Q15019 361 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
IRF3-225ENST00000600022 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 EHD4Q9H223 541 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
IRF3-225ENST00000600022 SPDYE16A6NNV3 312 aaPredicted RBP16.59■□□□□ 0.25
IRF3-225ENST00000600022 APBB1O00213 710 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 CHGBP05060 677 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 CYP2C19P33261 490 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 MDM2Q00987 491 aaPredicted RBP16.59■□□□□ 0.25
IRF3-225ENST00000600022 GABPAQ06546 454 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 MAP3K12Q12852 859 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 DEFB123Q8N688 67 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 SLC44A5Q8NCS7 719 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 APBA2Q99767 749 aa16.59■□□□□ 0.25
IRF3-225ENST00000600022 RPAP3Q9H6T3 665 aaPredicted RBP16.59■□□□□ 0.25
IRF3-225ENST00000600022 DLL1O00548 723 aa16.58■□□□□ 0.24
IRF3-225ENST00000600022 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
IRF3-225ENST00000600022 CLEC10AQ8IUN9 316 aa16.58■□□□□ 0.24
IRF3-225ENST00000600022 SIAH1Q8IUQ4 282 aa16.58■□□□□ 0.24
IRF3-225ENST00000600022 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.24
IRF3-225ENST00000600022 UBE2OQ9C0C9 1292 aaKnown RBP16.58■□□□□ 0.24
IRF3-225ENST00000600022 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
IRF3-225ENST00000600022 MAGEB6P1A0A0J9YX57 407 aa16.57■□□□□ 0.24
IRF3-225ENST00000600022 IGHA2P01877 340 aa16.57■□□□□ 0.24
IRF3-225ENST00000600022 POLR3DP05423 398 aaPredicted RBP16.57■□□□□ 0.24
IRF3-225ENST00000600022 PDE6AP16499 860 aa16.57■□□□□ 0.24
IRF3-225ENST00000600022 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
IRF3-225ENST00000600022 SLC9C2Q5TAH2 1124 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms