RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CCNA1P78396 465 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L24Q0WX57 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 MORN1Q5T089 497 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 APBA2Q99767 749 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 PORCNQ9H237 461 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 GLRX3O76003 335 aaKnown RBP25.75■■□□□ 1.71
PNKP-212ENST00000599454 RLBP1P12271 317 aa25.75■■□□□ 1.71
PNKP-212ENST00000599454 CERKLQ49MI3 558 aaPredicted RBP25.75■■□□□ 1.71
PNKP-212ENST00000599454 CEP85Q6P2H3 762 aa25.75■■□□□ 1.71
PNKP-212ENST00000599454 KIAA1683Q9H0B3 1180 aa25.75■■□□□ 1.71
PNKP-212ENST00000599454 CWC22Q9HCG8 908 aaKnown RBP25.75■■□□□ 1.71
PNKP-212ENST00000599454 CACNB2Q08289 660 aaPredicted RBP25.74■■□□□ 1.71
PNKP-212ENST00000599454 CABP5Q9NP86 173 aa25.74■■□□□ 1.71
PNKP-212ENST00000599454 RAB3GAP1Q15042 981 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 ABCB5Q2M3G0 1257 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 HSP90AB4PQ58FF6 505 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 POTEEQ6S8J3 1075 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 CATSPERGQ6ZRH7 1159 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 AACSQ86V21 672 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 ANTXR1Q9H6X2 564 aa25.73■■□□□ 1.71
PNKP-212ENST00000599454 ZMYND8Q9ULU4 1186 aaPredicted RBP25.73■■□□□ 1.71
PNKP-212ENST00000599454 MAP2K5Q13163 448 aa25.72■■□□□ 1.71
PNKP-212ENST00000599454 TTF1Q15361 905 aaPredicted RBP25.72■■□□□ 1.71
PNKP-212ENST00000599454 LBX2Q6XYB7 198 aa25.72■■□□□ 1.71
PNKP-212ENST00000599454 SOX1O00570 391 aaPredicted RBP25.71■■□□□ 1.71
PNKP-212ENST00000599454 VCAM1P19320 739 aa25.71■■□□□ 1.71
PNKP-212ENST00000599454 HNRNPUQ00839 825 aaKnown RBP eCLIP25.71■■□□□ 1.71
PNKP-212ENST00000599454 ZYXQ15942 572 aaKnown RBP25.71■■□□□ 1.71
PNKP-212ENST00000599454 GPR153Q6NV75 609 aa25.71■■□□□ 1.71
PNKP-212ENST00000599454 RIOK1Q9BRS2 568 aaKnown RBP25.71■■□□□ 1.71
PNKP-212ENST00000599454 EXOC6BQ9Y2D4 811 aa25.71■■□□□ 1.71
PNKP-212ENST00000599454 NDUFB9Q9Y6M9 179 aa25.71■■□□□ 1.71
PNKP-212ENST00000599454 PFASO15067 1338 aa25.7■■□□□ 1.71
PNKP-212ENST00000599454 CNMDO75829 334 aa25.7■■□□□ 1.7
PNKP-212ENST00000599454 COL6A1P12109 1028 aa25.7■■□□□ 1.7
PNKP-212ENST00000599454 CCL14Q16627 93 aa25.7■■□□□ 1.7
PNKP-212ENST00000599454 EDC3Q96F86 508 aaKnown RBP25.7■■□□□ 1.7
PNKP-212ENST00000599454 MAGEB6P1A0A0J9YX57 407 aa25.69■■□□□ 1.7
PNKP-212ENST00000599454 SLC15A5A6NIM6 579 aa25.69■■□□□ 1.7
PNKP-212ENST00000599454 CCND3P30281 292 aaPredicted RBP25.69■■□□□ 1.7
PNKP-212ENST00000599454 SHMT1P34896 483 aa25.69■■□□□ 1.7
PNKP-212ENST00000599454 MFSD14CQ5VZR4 134 aa25.69■■□□□ 1.7
PNKP-212ENST00000599454 LHX8Q68G74 356 aa25.69■■□□□ 1.7
PNKP-212ENST00000599454 LRCH3Q96II8 777 aa25.69■■□□□ 1.7
PNKP-212ENST00000599454 POLR3DP05423 398 aaPredicted RBP25.68■■□□□ 1.7
PNKP-212ENST00000599454 PTPREP23469 700 aa25.68■■□□□ 1.7
PNKP-212ENST00000599454 PLCD1P51178 756 aa25.68■■□□□ 1.7
PNKP-212ENST00000599454 ACER1Q8TDN7 264 aa25.68■■□□□ 1.7
PNKP-212ENST00000599454 CRNKL1Q9BZJ0 848 aaKnown RBP25.68■■□□□ 1.7
PNKP-212ENST00000599454 IVNS1ABPQ9Y6Y0 642 aa25.68■■□□□ 1.7
PNKP-212ENST00000599454 ZNF236Q9UL36 1845 aa25.67■■□□□ 1.7
PNKP-212ENST00000599454 MAGEA10P43363 369 aaPredicted RBP25.67■■□□□ 1.7
PNKP-212ENST00000599454 GABPAQ06546 454 aa25.67■■□□□ 1.7
PNKP-212ENST00000599454 RLFQ13129 1914 aa25.67■■□□□ 1.7
PNKP-212ENST00000599454 MSCO60682 206 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 HOXC6P09630 235 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 SYN1P17600 705 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 LRIT3Q3SXY7 679 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 WDR78Q5VTH9 848 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 RHPN1Q8TCX5 695 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.66■■□□□ 1.7
PNKP-212ENST00000599454 RPAP3Q9H6T3 665 aaPredicted RBP25.66■■□□□ 1.7
PNKP-212ENST00000599454 MYH7P12883 1935 aa25.66■■□□□ 1.7
PNKP-212ENST00000599454 SPDYE16A6NNV3 312 aaPredicted RBP25.65■■□□□ 1.7
PNKP-212ENST00000599454 PDE6AP16499 860 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 GUCY1A2P33402 732 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 GRB14Q14449 540 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 SLC9C2Q5TAH2 1124 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 TDHQ8IZJ6 230 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 CLASRPQ8N2M8 674 aaKnown RBP25.65■■□□□ 1.7
PNKP-212ENST00000599454 BTBD7Q9P203 1132 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 A0A0G2JMZ2 1700 aa25.65■■□□□ 1.7
PNKP-212ENST00000599454 BAZ2AQ9UIF9 1905 aaKnown RBP25.65■■□□□ 1.7
PNKP-212ENST00000599454 MS4A1P11836 297 aa25.64■■□□□ 1.7
PNKP-212ENST00000599454 IL1RAPL2Q9NP60 686 aa25.64■■□□□ 1.7
PNKP-212ENST00000599454 MCM9Q9NXL9 1143 aa25.64■■□□□ 1.7
PNKP-212ENST00000599454 ZNFX1Q9P2E3 1918 aaKnown RBP25.64■■□□□ 1.69
PNKP-212ENST00000599454 LAMA3Q16787 3333 aa25.64■■□□□ 1.69
PNKP-212ENST00000599454 PARP14Q460N5 1801 aa25.63■■□□□ 1.69
PNKP-212ENST00000599454 ATP2B2Q01814 1243 aa25.63■■□□□ 1.69
PNKP-212ENST00000599454 SEPT2Q15019 361 aa25.63■■□□□ 1.69
PNKP-212ENST00000599454 KIF1BPQ96EK5 621 aa25.63■■□□□ 1.69
PNKP-212ENST00000599454 UBE2OQ9C0C9 1292 aaKnown RBP25.63■■□□□ 1.69
PNKP-212ENST00000599454 HOXC10Q9NYD6 342 aa25.63■■□□□ 1.69
PNKP-212ENST00000599454 COG2Q14746 738 aa25.62■■□□□ 1.69
PNKP-212ENST00000599454 PANK1Q8TE04 598 aa25.62■■□□□ 1.69
PNKP-212ENST00000599454 FLRT1Q9NZU1 646 aa25.62■■□□□ 1.69
PNKP-212ENST00000599454 DDX20Q9UHI6 824 aaKnown RBP25.62■■□□□ 1.69
PNKP-212ENST00000599454 ZNF532Q9HCE3 1301 aa25.62■■□□□ 1.69
PNKP-212ENST00000599454 MPHOSPH10O00566 681 aaKnown RBP25.61■■□□□ 1.69
PNKP-212ENST00000599454 LRRC26Q2I0M4 334 aa25.61■■□□□ 1.69
PNKP-212ENST00000599454 RPAP2Q8IXW5 612 aaPredicted RBP25.61■■□□□ 1.69
PNKP-212ENST00000599454 SLC17A8Q8NDX2 589 aa25.61■■□□□ 1.69
PNKP-212ENST00000599454 SWAP70Q9UH65 585 aa25.61■■□□□ 1.69
PNKP-212ENST00000599454 STRNO43815 780 aa25.6■■□□□ 1.69
PNKP-212ENST00000599454 HMMRO75330 724 aa25.6■■□□□ 1.69
PNKP-212ENST00000599454 IFIT2P09913 472 aaKnown RBP25.6■■□□□ 1.69
PNKP-212ENST00000599454 TMEM179Q6ZVK1 233 aa25.6■■□□□ 1.69
PNKP-212ENST00000599454 LPAR1Q92633 364 aa25.6■■□□□ 1.69
PNKP-212ENST00000599454 DCP1AQ9NPI6 582 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms