RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 POLR3DP05423 398 aaPredicted RBP18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 USP17L24Q0WX57 530 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 MAP3K21Q5TCX8 1036 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 DPF3Q92784 378 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 HAUS7Q99871 368 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 NUDT12Q9BQG2 462 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 PAG1Q9NWQ8 432 aa18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 COLQQ9Y215 455 aaPredicted RBP18.46■□□□□ 0.55
SPTBN4-213ENST00000598775 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 GUCY1A2P33402 732 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 ADD2P35612 726 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 Q3C1V9 767 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 CATSPERGQ6ZRH7 1159 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 FEZ1Q99689 392 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 HMX1Q9NP08 348 aaPredicted RBP18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 ATP8A2Q9NTI2 1148 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 MCM9Q9NXL9 1143 aa18.45■□□□□ 0.54
SPTBN4-213ENST00000598775 APBB1O00213 710 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 VCAM1P19320 739 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 FXR1P51114 621 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 MORN1Q5T089 497 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 TRIB2Q92519 343 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 SWAP70Q9UH65 585 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 NR2E3Q9Y5X4 410 aa18.44■□□□□ 0.54
SPTBN4-213ENST00000598775 UBE3CQ15386 1083 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 GPR142Q7Z601 462 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 ACER1Q8TDN7 264 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 EDC3Q96F86 508 aaKnown RBP18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 PORCNQ9H237 461 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 PRO3102Q9H379 93 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
SPTBN4-213ENST00000598775 CNMDO75829 334 aa18.42■□□□□ 0.54
SPTBN4-213ENST00000598775 RGS2P41220 211 aa18.42■□□□□ 0.54
SPTBN4-213ENST00000598775 CCNA1P78396 465 aa18.42■□□□□ 0.54
SPTBN4-213ENST00000598775 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
SPTBN4-213ENST00000598775 SDR42E1Q8WUS8 393 aa18.42■□□□□ 0.54
SPTBN4-213ENST00000598775 MYH7P12883 1935 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 SZT2Q5T011 3432 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 PEX10O60683 326 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 CYP2B6P20813 491 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 TRIM32Q13049 653 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 SEPT2Q15019 361 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 TMEM179Q6ZVK1 233 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 NECAB2Q7Z6G3 386 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 PAGR1Q9BTK6 254 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 OGDHLQ9ULD0 1010 aa18.41■□□□□ 0.54
SPTBN4-213ENST00000598775 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 ZYXQ15942 572 aaKnown RBP18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 ZSCAN25Q6NSZ9 544 aa18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 CCAR1Q8IX12 1150 aaKnown RBP18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 PAWRQ96IZ0 340 aaKnown RBP18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 APBA2Q99767 749 aa18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 ARMT1Q9H993 441 aa18.4■□□□□ 0.54
SPTBN4-213ENST00000598775 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 SPDYE16A6NNV3 312 aaPredicted RBP18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 MBD4O95243 580 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 HOXC6P09630 235 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 PRKAR2AP13861 404 aaKnown RBP18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 ZKSCAN1P17029 563 aaPredicted RBP18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 MNX1P50219 401 aaPredicted RBP18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 EVX2Q03828 476 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 C12orf60Q5U649 245 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 LPAR1Q92633 364 aa18.39■□□□□ 0.53
SPTBN4-213ENST00000598775 SLC15A5A6NIM6 579 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 EVI5O60447 810 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 CACNB2Q08289 660 aaPredicted RBP18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 COG2Q14746 738 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 HOXC10Q9NYD6 342 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 BTBD7Q9P203 1132 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 MYH8P13535 1937 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 RLFQ13129 1914 aa18.38■□□□□ 0.53
SPTBN4-213ENST00000598775 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 A0A1W2PPC1 479 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 PRKAB2O43741 272 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 IGHA2P01877 340 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 CYP2D6P10635 497 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 PTPREP23469 700 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 GRB14Q14449 540 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 SIAH1Q8IUQ4 282 aa18.37■□□□□ 0.53
SPTBN4-213ENST00000598775 SLC44A5Q8NCS7 719 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms