RNA–Protein interactions for RNA: ENST00000598636.1

BBC3-205, Transcript of BCL2 binding component 3, humanhuman

TSL 2

Gene BBC3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-205ENST00000598636 CCDC17Q96LX7 622 aa28.46■■■□□ 2.15
BBC3-205ENST00000598636 TMOD4Q9NZQ9 345 aa28.46■■■□□ 2.15
BBC3-205ENST00000598636 CPA4Q9UI42 421 aa28.46■■■□□ 2.15
BBC3-205ENST00000598636 FEZ1Q99689 392 aa28.45■■■□□ 2.14
BBC3-205ENST00000598636 KIAA1683Q9H0B3 1180 aa28.45■■■□□ 2.14
BBC3-205ENST00000598636 EMILIN3Q9NT22 766 aa28.45■■■□□ 2.14
BBC3-205ENST00000598636 PNMA3Q9UL41 463 aa28.45■■■□□ 2.14
BBC3-205ENST00000598636 CCDC171Q6TFL3 1326 aa28.44■■■□□ 2.14
BBC3-205ENST00000598636 BCRP11274 1271 aa28.44■■■□□ 2.14
BBC3-205ENST00000598636 PABPC4Q13310 644 aaKnown RBP eCLIP28.44■■■□□ 2.14
BBC3-205ENST00000598636 USP17L2Q6R6M4 530 aa28.44■■■□□ 2.14
BBC3-205ENST00000598636 C12orf42Q96LP6 360 aa28.44■■■□□ 2.14
BBC3-205ENST00000598636 RASA1P20936 1047 aa28.43■■■□□ 2.14
BBC3-205ENST00000598636 CLEC10AQ8IUN9 316 aa28.43■■■□□ 2.14
BBC3-205ENST00000598636 STK11IPQ8N1F8 1099 aa28.43■■■□□ 2.14
BBC3-205ENST00000598636 ABHD8Q96I13 439 aa28.43■■■□□ 2.14
BBC3-205ENST00000598636 DIAPH3Q9NSV4 1193 aa28.43■■■□□ 2.14
BBC3-205ENST00000598636 A0A1W2PRG0 241 aa28.42■■■□□ 2.14
BBC3-205ENST00000598636 HIP1O00291 1037 aa28.42■■■□□ 2.14
BBC3-205ENST00000598636 USP14P54578 494 aa28.42■■■□□ 2.14
BBC3-205ENST00000598636 PPARAQ07869 468 aa28.42■■■□□ 2.14
BBC3-205ENST00000598636 ZYXQ15942 572 aaKnown RBP28.42■■■□□ 2.14
BBC3-205ENST00000598636 OTOP1Q7RTM1 612 aa28.42■■■□□ 2.14
BBC3-205ENST00000598636 SMCR8Q8TEV9 937 aaPredicted RBP28.42■■■□□ 2.14
BBC3-205ENST00000598636 HOXA7P31268 230 aaPredicted RBP28.41■■■□□ 2.14
BBC3-205ENST00000598636 LACTBP83111 547 aaPredicted RBP28.41■■■□□ 2.14
BBC3-205ENST00000598636 ICA1Q05084 483 aa28.41■■■□□ 2.14
BBC3-205ENST00000598636 ALX1Q15699 326 aa28.41■■■□□ 2.14
BBC3-205ENST00000598636 ASCC2Q9H1I8 757 aaPredicted RBP28.41■■■□□ 2.14
BBC3-205ENST00000598636 TRIM17Q9Y577 477 aa28.41■■■□□ 2.14
BBC3-205ENST00000598636 ZMYM6O95789 1325 aa28.41■■■□□ 2.14
BBC3-205ENST00000598636 HSPD1P10809 573 aaKnown RBP28.4■■■□□ 2.14
BBC3-205ENST00000598636 PKN2Q16513 984 aaKnown RBP28.4■■■□□ 2.14
BBC3-205ENST00000598636 IFFO2Q5TF58 517 aa28.4■■■□□ 2.14
BBC3-205ENST00000598636 CWC27Q6UX04 472 aaKnown RBP28.4■■■□□ 2.14
BBC3-205ENST00000598636 SIAH1Q8IUQ4 282 aa28.4■■■□□ 2.14
BBC3-205ENST00000598636 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.4■■■□□ 2.14
BBC3-205ENST00000598636 ARHGAP39Q9C0H5 1083 aa28.4■■■□□ 2.14
BBC3-205ENST00000598636 MKNK2Q9HBH9 465 aa28.4■■■□□ 2.14
BBC3-205ENST00000598636 PRDM1O75626 825 aa28.39■■■□□ 2.14
BBC3-205ENST00000598636 NEFLP07196 543 aa28.39■■■□□ 2.14
BBC3-205ENST00000598636 OSBPP22059 807 aa28.39■■■□□ 2.14
BBC3-205ENST00000598636 EFCC1Q9HA90 598 aa28.39■■■□□ 2.14
BBC3-205ENST00000598636 ZNF287Q9HBT7 754 aa28.39■■■□□ 2.14
BBC3-205ENST00000598636 CENPBP07199 599 aaPredicted RBP28.38■■■□□ 2.13
BBC3-205ENST00000598636 VCAM1P19320 739 aa28.38■■■□□ 2.13
BBC3-205ENST00000598636 MFAP1P55081 439 aaKnown RBP28.38■■■□□ 2.13
BBC3-205ENST00000598636 LAMA4Q16363 1823 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 FGAP02671 866 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 SLC3A2P08195 630 aaKnown RBP28.37■■■□□ 2.13
BBC3-205ENST00000598636 IRX3P78415 501 aaPredicted RBP28.37■■■□□ 2.13
BBC3-205ENST00000598636 PDE4BQ07343 736 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 FBXO46Q6PJ61 603 aaPredicted RBP28.37■■■□□ 2.13
BBC3-205ENST00000598636 KANSL2Q9H9L4 492 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 ARHGEF10LQ9HCE6 1279 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 ANAPC4Q9UJX5 808 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 PLIN4Q96Q06 1357 aa28.37■■■□□ 2.13
BBC3-205ENST00000598636 MGAMO43451 1857 aa28.36■■■□□ 2.13
BBC3-205ENST00000598636 CTGFP29279 349 aa28.36■■■□□ 2.13
BBC3-205ENST00000598636 KIF22Q14807 665 aa28.36■■■□□ 2.13
BBC3-205ENST00000598636 CCDC136Q96JN2 1154 aa28.36■■■□□ 2.13
BBC3-205ENST00000598636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.36■■■□□ 2.131e-7■■■■□ 23.1
BBC3-205ENST00000598636 EEF2P13639 858 aaKnown RBP28.35■■■□□ 2.13
BBC3-205ENST00000598636 GCLCP48506 637 aaPredicted RBP28.35■■■□□ 2.13
BBC3-205ENST00000598636 CTDSPL2Q05D32 466 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 FAM110CQ1W6H9 321 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 SKAP1Q86WV1 359 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 ANKRD13CQ8N6S4 541 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 IL25Q9H293 177 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 SH2D4AQ9H788 454 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 TMX2Q9Y320 296 aa28.35■■■□□ 2.13
BBC3-205ENST00000598636 IGKV6D-41A0A0C4DH26 115 aa28.34■■■□□ 2.13
BBC3-205ENST00000598636 HERVK_113P62684 666 aa28.34■■■□□ 2.13
BBC3-205ENST00000598636 ARHGEF6Q15052 776 aa28.34■■■□□ 2.13
BBC3-205ENST00000598636 TRIM47Q96LD4 638 aa28.34■■■□□ 2.13
BBC3-205ENST00000598636 P2RX7Q99572 595 aaKnown RBP28.34■■■□□ 2.13
BBC3-205ENST00000598636 KIAA1755Q5JYT7 1200 aa28.33■■■□□ 2.13
BBC3-205ENST00000598636 ZNF444Q8N0Y2 327 aaPredicted RBP28.33■■■□□ 2.13
BBC3-205ENST00000598636 RPAP3Q9H6T3 665 aaPredicted RBP28.33■■■□□ 2.13
BBC3-205ENST00000598636 HPS5Q9UPZ3 1129 aa28.33■■■□□ 2.13
BBC3-205ENST00000598636 PTPN22Q9Y2R2 807 aa28.33■■■□□ 2.13
BBC3-205ENST00000598636 TACC3Q9Y6A5 838 aa28.33■■■□□ 2.13
BBC3-205ENST00000598636 USP17L15C9J2P7 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L13C9JLJ4 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L11C9JVI0 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L18D6R9N7 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L22D6RA61 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L17D6RBQ6 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L19D6RCP7 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L20D6RJB6 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 PSMC4P43686 418 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 USP17L24Q0WX57 530 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 VCPKMTQ9H867 229 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 RAD50Q92878 1312 aa28.32■■■□□ 2.12
BBC3-205ENST00000598636 MYH4Q9Y623 1939 aa28.31■■■□□ 2.12
BBC3-205ENST00000598636 ECM2O94769 699 aaPredicted RBP28.31■■■□□ 2.12
BBC3-205ENST00000598636 GNRH1P01148 92 aa28.31■■■□□ 2.12
BBC3-205ENST00000598636 CHMLP26374 656 aa28.31■■■□□ 2.12
BBC3-205ENST00000598636 ATP2B2Q01814 1243 aa28.31■■■□□ 2.12
BBC3-205ENST00000598636 CATSPERGQ6ZRH7 1159 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms