RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CABP5Q9NP86 173 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 SLC4A4Q9Y6R1 1079 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 A0A0C4DFX4 3053 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 MYH7P12883 1935 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 ADCY3O60266 1144 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-203ENST00000598359 HERVK_113P62684 666 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 CLEC10AQ8IUN9 316 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 ATP8A2Q9NTI2 1148 aa16.57■□□□□ 0.24
SCAF1-203ENST00000598359 BAZ2AQ9UIF9 1905 aaKnown RBP16.57■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L12C9JPN9 530 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L21D6R901 530 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 NEFLP07196 543 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 CCL5P13501 91 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 COL6A3P12111 3177 aa16.56■□□□□ 0.24
SCAF1-203ENST00000598359 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 AKR1B1P15121 316 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 C12orf60Q5U649 245 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 SLAIN1Q8ND83 568 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 COA7Q96BR5 231 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 RBPJLQ9UBG7 517 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 MORF4L1Q9UBU8 362 aa16.55■□□□□ 0.24
SCAF1-203ENST00000598359 RANBP2P49792 3224 aaKnown RBP16.54■□□□□ 0.24
SCAF1-203ENST00000598359 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
SCAF1-203ENST00000598359 INHAP05111 366 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 VCAM1P19320 739 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 Q3C1V9 767 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 SHISA4Q96DD7 197 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 STRBPQ96SI9 672 aaKnown RBP16.54■□□□□ 0.24
SCAF1-203ENST00000598359 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
SCAF1-203ENST00000598359 M0R2C6 588 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 CDK8P49336 464 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 KIAA1755Q5JYT7 1200 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 ANKRD45Q5TZF3 282 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 GPRC5AQ8NFJ5 357 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 RNF208Q9H0X6 261 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 PORCNQ9H237 461 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 RPAP3Q9H6T3 665 aaPredicted RBP16.53■□□□□ 0.24
SCAF1-203ENST00000598359 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
SCAF1-203ENST00000598359 TTC41PQ6P2S7 1318 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 CNMDO75829 334 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP14P54578 494 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 ERVK-9P63128 1117 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 ERVK-24P63145 666 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 UBXN2AP68543 259 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 IRF5Q13568 498 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 CATSPERGQ6ZRH7 1159 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 SIAH1Q8IUQ4 282 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 APPBP2Q92624 585 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
SCAF1-203ENST00000598359 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
SCAF1-203ENST00000598359 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.23
SCAF1-203ENST00000598359 H0YGN5 161 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 GPAA1O43292 621 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 MX1P20591 662 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 TRIM32Q13049 653 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 TMEM179Q6ZVK1 233 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
SCAF1-203ENST00000598359 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-203ENST00000598359 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 PLXNB2O15031 1838 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 ERC2O15083 957 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
SCAF1-203ENST00000598359 CYP2B6P20813 491 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 PXYLP1Q8TE99 480 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 CUL9Q8IWT3 2517 aa16.5■□□□□ 0.23
SCAF1-203ENST00000598359 MYH8P13535 1937 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 GJB1P08034 283 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-203ENST00000598359 GJA8P48165 433 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 ICA1Q05084 483 aa16.49■□□□□ 0.23
SCAF1-203ENST00000598359 HDAC1Q13547 482 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-203ENST00000598359 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms