RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 SCYL3Q8IZE3 742 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMIM7-216ENST00000598278 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 GBA2Q9HCG7 927 aaPredicted RBP13.51□□□□□ -0.25
SMIM7-216ENST00000598278 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 NYAP2Q9P242 653 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 STX8Q9UNK0 236 aa13.51□□□□□ -0.25
SMIM7-216ENST00000598278 USP17L5A8MUK1 530 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 NMT2O60551 498 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
SMIM7-216ENST00000598278 AK2P54819 239 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 ICA1Q05084 483 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 FSTL1Q12841 308 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
SMIM7-216ENST00000598278 SEPT2Q15019 361 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 SEC23AQ15436 765 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 ENAHQ8N8S7 591 aaPredicted RBP13.5□□□□□ -0.25
SMIM7-216ENST00000598278 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 ANKS1AQ92625 1134 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 BRF1Q92994 677 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 LY9Q9HBG7 655 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 ARHGEF10LQ9HCE6 1279 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 IL17RBQ9NRM6 502 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 OTOFQ9HC10 1997 aa13.5□□□□□ -0.25
SMIM7-216ENST00000598278 TOP1P11387 765 aaKnown RBP13.49□□□□□ -0.25
SMIM7-216ENST00000598278 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
SMIM7-216ENST00000598278 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
SMIM7-216ENST00000598278 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
SMIM7-216ENST00000598278 SNX21Q969T3 373 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
SMIM7-216ENST00000598278 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMIM7-216ENST00000598278 SH2D4AQ9H788 454 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 CLIP2Q9UDT6 1046 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 LIMCH1Q9UPQ0 1083 aa13.49□□□□□ -0.25
SMIM7-216ENST00000598278 EEF2P13639 858 aaKnown RBP13.48□□□□□ -0.25
SMIM7-216ENST00000598278 NOVP48745 357 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMIM7-216ENST00000598278 BECN1Q14457 450 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 RCSD1Q6JBY9 416 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
SMIM7-216ENST00000598278 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 MKL1Q969V6 931 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 ZNF274Q96GC6 653 aaPredicted RBP13.48□□□□□ -0.25
SMIM7-216ENST00000598278 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
SMIM7-216ENST00000598278 SLC12A7Q9Y666 1083 aa13.48□□□□□ -0.25
SMIM7-216ENST00000598278 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 CALM1P0DP23 149 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 CALM2P0DP24 149 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 CALM3P0DP25 149 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 PTPRAP18433 802 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 RCAN1P53805 252 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 EVCP57679 992 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 JAG1P78504 1218 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 VGLL4Q14135 290 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
SMIM7-216ENST00000598278 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 TMEM47Q9BQJ4 181 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
SMIM7-216ENST00000598278 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
SMIM7-216ENST00000598278 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
SMIM7-216ENST00000598278 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
SMIM7-216ENST00000598278 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 DDAH1O94760 285 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 USP14P54578 494 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 CST9Q5W186 159 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 APOA5Q6Q788 366 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 MOB2Q70IA6 237 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
SMIM7-216ENST00000598278 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 ZNF654Q8IZM8 581 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 WDR18Q9BV38 432 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
SMIM7-216ENST00000598278 C19orf81C9J6K1 198 aa13.45□□□□□ -0.26
SMIM7-216ENST00000598278 USP17L10C9JJH3 530 aa13.45□□□□□ -0.26
SMIM7-216ENST00000598278 K7ELQ4 463 aaPredicted RBP13.45□□□□□ -0.26
SMIM7-216ENST00000598278 ZBTB43O43298 467 aa13.45□□□□□ -0.26
SMIM7-216ENST00000598278 PPATQ06203 517 aa13.45□□□□□ -0.26
SMIM7-216ENST00000598278 PPP2R5BQ15173 497 aa13.45□□□□□ -0.26
SMIM7-216ENST00000598278 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms