RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 GUCY1A2P33402 732 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L24Q0WX57 530 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 C12orf60Q5U649 245 aa27.69■■■□□ 2.02
SSBP4-205ENST00000598159 PRPF38BQ5VTL8 546 aaKnown RBP27.69■■■□□ 2.02
SSBP4-205ENST00000598159 YTHDC1Q96MU7 727 aaKnown RBP27.69■■■□□ 2.02
SSBP4-205ENST00000598159 TTC41PQ6P2S7 1318 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L12C9JPN9 530 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 USP17L21D6R901 530 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 MPHOSPH10O00566 681 aaKnown RBP27.68■■■□□ 2.02
SSBP4-205ENST00000598159 CCL5P13501 91 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 EVX2Q03828 476 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 SEPT2Q15019 361 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 ZYXQ15942 572 aaKnown RBP27.68■■■□□ 2.02
SSBP4-205ENST00000598159 ACER1Q8TDN7 264 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 CRBNQ96SW2 442 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 RBPJLQ9UBG7 517 aa27.68■■■□□ 2.02
SSBP4-205ENST00000598159 ERC2O15083 957 aa27.67■■■□□ 2.02
SSBP4-205ENST00000598159 GJB1P08034 283 aa27.67■■■□□ 2.02
SSBP4-205ENST00000598159 ZFYP08048 801 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-205ENST00000598159 CATSPERGQ6ZRH7 1159 aa27.67■■■□□ 2.02
SSBP4-205ENST00000598159 TMEM179Q6ZVK1 233 aa27.67■■■□□ 2.02
SSBP4-205ENST00000598159 RNF208Q9H0X6 261 aa27.67■■■□□ 2.02
SSBP4-205ENST00000598159 GJD2Q9UKL4 321 aa27.67■■■□□ 2.02
SSBP4-205ENST00000598159 BAZ2AQ9UIF9 1905 aaKnown RBP27.67■■■□□ 2.02
SSBP4-205ENST00000598159 LRRFIP1Q32MZ4 808 aaKnown RBP27.66■■■□□ 2.02
SSBP4-205ENST00000598159 DYNLL2Q96FJ2 89 aa27.66■■■□□ 2.02
SSBP4-205ENST00000598159 CCDC17Q96LX7 622 aa27.66■■■□□ 2.02
SSBP4-205ENST00000598159 STRBPQ96SI9 672 aaKnown RBP27.66■■■□□ 2.02
SSBP4-205ENST00000598159 TXNRD2Q9NNW7 524 aa27.66■■■□□ 2.02
SSBP4-205ENST00000598159 RNF113AO15541 343 aaKnown RBP27.65■■■□□ 2.02
SSBP4-205ENST00000598159 ELNP15502 786 aa27.65■■■□□ 2.02
SSBP4-205ENST00000598159 TSHZ3Q63HK5 1081 aa27.65■■■□□ 2.02
SSBP4-205ENST00000598159 SLC44A5Q8NCS7 719 aa27.65■■■□□ 2.02
SSBP4-205ENST00000598159 ZBTB47Q9UFB7 747 aaPredicted RBP27.65■■■□□ 2.02
SSBP4-205ENST00000598159 GJA8P48165 433 aa27.64■■■□□ 2.02
SSBP4-205ENST00000598159 CDK8P49336 464 aa27.64■■■□□ 2.02
SSBP4-205ENST00000598159 Q3C1V9 767 aa27.64■■■□□ 2.02
SSBP4-205ENST00000598159 CTR9Q6PD62 1173 aa27.64■■■□□ 2.02
SSBP4-205ENST00000598159 APPBP2Q92624 585 aa27.64■■■□□ 2.02
SSBP4-205ENST00000598159 BRCA2P51587 3418 aa27.64■■■□□ 2.01
SSBP4-205ENST00000598159 GLRX3O76003 335 aaKnown RBP27.63■■■□□ 2.01
SSBP4-205ENST00000598159 CAPN2P17655 700 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 VCAM1P19320 739 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 MAPK4P31152 587 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 ERVK-9P63128 1117 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 ERVK-24P63145 666 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 AAMPQ13685 434 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 GIMAP6Q6P9H5 292 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 C16orf86Q6ZW13 317 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 CCAR1Q8IX12 1150 aaKnown RBP27.63■■■□□ 2.01
SSBP4-205ENST00000598159 RABGAP1Q9Y3P9 1069 aa27.63■■■□□ 2.01
SSBP4-205ENST00000598159 INHAP05111 366 aa27.62■■■□□ 2.01
SSBP4-205ENST00000598159 OSBP2Q969R2 916 aa27.62■■■□□ 2.01
SSBP4-205ENST00000598159 GCC1Q96CN9 775 aa27.62■■■□□ 2.01
SSBP4-205ENST00000598159 UNC93B1Q9H1C4 597 aa27.62■■■□□ 2.01
SSBP4-205ENST00000598159 ARPP21Q9UBL0 812 aaPredicted RBP27.62■■■□□ 2.01
SSBP4-205ENST00000598159 MYH8P13535 1937 aa27.62■■■□□ 2.01
SSBP4-205ENST00000598159 CYP2D7A0A087X1C5 515 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 A0A1W2PRG0 241 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 PEX10O60683 326 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 HDAC1Q13547 482 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-205ENST00000598159 SBK1Q52WX2 424 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 POTEEQ6S8J3 1075 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 LBX2Q6XYB7 198 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 PI4K2BQ8TCG2 481 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 NUDT12Q9BQG2 462 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 PAGR1Q9BTK6 254 aa27.61■■■□□ 2.01
SSBP4-205ENST00000598159 RPAP3Q9H6T3 665 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-205ENST00000598159 GSG1L2A8MUP6 293 aa27.6■■■□□ 2.01
SSBP4-205ENST00000598159 AKR1B1P15121 316 aa27.6■■■□□ 2.01
SSBP4-205ENST00000598159 GNAT2P19087 354 aa27.6■■■□□ 2.01
SSBP4-205ENST00000598159 ANKRD45Q5TZF3 282 aa27.6■■■□□ 2.01
SSBP4-205ENST00000598159 ARHGEF10LQ9HCE6 1279 aa27.6■■■□□ 2.01
SSBP4-205ENST00000598159 HOXC10Q9NYD6 342 aa27.6■■■□□ 2.01
SSBP4-205ENST00000598159 SGPL1O95470 568 aa27.59■■■□□ 2.01
SSBP4-205ENST00000598159 MX1P20591 662 aa27.59■■■□□ 2.01
SSBP4-205ENST00000598159 CCNA1P78396 465 aa27.59■■■□□ 2.01
SSBP4-205ENST00000598159 SOCS4Q8WXH5 440 aa27.59■■■□□ 2.01
SSBP4-205ENST00000598159 SHISA4Q96DD7 197 aa27.59■■■□□ 2.01
SSBP4-205ENST00000598159 SH2D4AQ9H788 454 aa27.59■■■□□ 2.01
SSBP4-205ENST00000598159 SMIM22K7EJ46 135 aa27.58■■■□□ 2.01
SSBP4-205ENST00000598159 XRCC5P13010 732 aaKnown RBP27.58■■■□□ 2.01
SSBP4-205ENST00000598159 COG2Q14746 738 aa27.58■■■□□ 2.01
SSBP4-205ENST00000598159 SIAH1Q8IUQ4 282 aa27.58■■■□□ 2.01
SSBP4-205ENST00000598159 OTUD7AQ8TE49 926 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-205ENST00000598159 U2AF1L4Q8WU68 220 aaKnown RBP27.58■■■□□ 2.01
SSBP4-205ENST00000598159 TMX2Q9Y320 296 aa27.58■■■□□ 2.01
SSBP4-205ENST00000598159 GPAA1O43292 621 aa27.57■■■□□ 2
SSBP4-205ENST00000598159 HMGCRP04035 888 aa27.57■■■□□ 2
SSBP4-205ENST00000598159 PLEKHH3Q7Z736 793 aa27.57■■■□□ 2
SSBP4-205ENST00000598159 LPAR1Q92633 364 aa27.57■■■□□ 2
SSBP4-205ENST00000598159 PORCNQ9H237 461 aa27.57■■■□□ 2
SSBP4-205ENST00000598159 KANSL2Q9H9L4 492 aa27.57■■■□□ 2
SSBP4-205ENST00000598159 PATL2C9JE40 543 aaKnown RBP27.56■■■□□ 2
SSBP4-205ENST00000598159 CNMDO75829 334 aa27.56■■■□□ 2
SSBP4-205ENST00000598159 CYP2B6P20813 491 aa27.56■■■□□ 2
SSBP4-205ENST00000598159 ICA1Q05084 483 aa27.56■■■□□ 2
SSBP4-205ENST00000598159 GPR142Q7Z601 462 aa27.56■■■□□ 2
SSBP4-205ENST00000598159 TRMT44Q8IYL2 757 aaKnown RBP27.56■■■□□ 2
SSBP4-205ENST00000598159 PLXNB2O15031 1838 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms