RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CNGA1P29973 690 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 SNX17Q15036 470 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
ZNF548-207ENST00000597400 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 PRDM5Q9NQX1 630 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-207ENST00000597400 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
ZNF548-207ENST00000597400 RAPGEFL1Q9UHV5 662 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 RABGAP1Q9Y3P9 1069 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 BDP1A6H8Y1 2624 aa13.45□□□□□ -0.26
ZNF548-207ENST00000597400 TRIM43BA6NCK2 446 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 SLC15A5A6NIM6 579 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 SRGAP3O43295 1099 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 GH2P01242 217 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 EPHB4P54760 987 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 MTX1Q13505 466 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 WDR78Q5VTH9 848 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L2Q6R6M4 530 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 SLC39A5Q6ZMH5 540 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 CRACR2BQ8N4Y2 399 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-207ENST00000597400 GTF3C2Q8WUA4 911 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-207ENST00000597400 TRIM43Q96BQ3 446 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-207ENST00000597400 SNRKQ9NRH2 765 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 LRP2BPQ9P2M1 347 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 NOB1Q9ULX3 412 aaKnown RBP13.44□□□□□ -0.26
ZNF548-207ENST00000597400 AKAP2Q9Y2D5 859 aa13.44□□□□□ -0.26
ZNF548-207ENST00000597400 SPDYE16A6NNV3 312 aaPredicted RBP13.43□□□□□ -0.26
ZNF548-207ENST00000597400 E9PSI1 815 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 MSCO60682 206 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 FOSL2P15408 326 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 VCAM1P19320 739 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 PPP4CP60510 307 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
ZNF548-207ENST00000597400 SMAD3P84022 425 aaKnown RBP13.43□□□□□ -0.26
ZNF548-207ENST00000597400 SLFN5Q08AF3 891 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 NAA16Q6N069 864 aaPredicted RBP13.43□□□□□ -0.26
ZNF548-207ENST00000597400 CATSPERGQ6ZRH7 1159 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 ACER1Q8TDN7 264 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
ZNF548-207ENST00000597400 PRKAG2Q9UGJ0 569 aa13.43□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L15C9J2P7 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L13C9JLJ4 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L11C9JVI0 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L18D6R9N7 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L22D6RA61 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L17D6RBQ6 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L19D6RCP7 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L20D6RJB6 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 CYP2E1P05181 493 aaPredicted RBP13.42□□□□□ -0.26
ZNF548-207ENST00000597400 ATP2B2Q01814 1243 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 USP17L24Q0WX57 530 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 TATDN1Q6P1N9 297 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 LBX2Q6XYB7 198 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 FOXP4Q8IVH2 680 aaPredicted RBP13.42□□□□□ -0.26
ZNF548-207ENST00000597400 GINM1Q9NU53 330 aa13.42□□□□□ -0.26
ZNF548-207ENST00000597400 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 COL9A1P20849 921 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 CCNA1P78396 465 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 FEZ1Q99689 392 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 TRANK1O15050 2925 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 NCOR1O75376 2440 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 MYO9BQ13459 2157 aa13.41□□□□□ -0.26
ZNF548-207ENST00000597400 ANP32CO43423 234 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
ZNF548-207ENST00000597400 BAG3O95817 575 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 ADORA2AP29274 412 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 ADCYAP1R1P41586 468 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 EVX2Q03828 476 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 GRIN2CQ14957 1233 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 PRAMEF19Q5SWL8 479 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
ZNF548-207ENST00000597400 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
ZNF548-207ENST00000597400 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.26
ZNF548-207ENST00000597400 PIH1D3Q9NQM4 214 aaKnown RBP13.4□□□□□ -0.26
ZNF548-207ENST00000597400 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
ZNF548-207ENST00000597400 KBTBD13C9JR72 458 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 COBLO75128 1261 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 PLCG2P16885 1265 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 LRRC41Q15345 812 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 DBNDD2Q9BQY9 259 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-207ENST00000597400 TNNQ9UQP3 1299 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 MCM3APO60318 1980 aa13.39□□□□□ -0.27
ZNF548-207ENST00000597400 SEPT4O43236 478 aa13.38□□□□□ -0.27
ZNF548-207ENST00000597400 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-207ENST00000597400 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
ZNF548-207ENST00000597400 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
ZNF548-207ENST00000597400 SHMT1P34896 483 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms