RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 ANGEL1Q9UNK9 670 aaKnown RBP13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 PPP2R3BQ9Y5P8 575 aa13.49□□□□□ -0.25
SH2D3A-206ENST00000597254 TSPY2A6NKD2 308 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 CCDC85CA6NKD9 419 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 SHMT1P34896 483 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 DGKZQ13574 1117 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 BRF1Q92994 677 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 MCOLN1Q9GZU1 580 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
SH2D3A-206ENST00000597254 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 SEC23AQ15436 765 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 IQCA1Q86XH1 822 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 TEPSINQ96N21 525 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 ZSCAN10Q96SZ4 725 aaPredicted RBP13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 TCP11L1Q9NUJ3 509 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 SIPA1L1O43166 1804 aa13.47□□□□□ -0.25
SH2D3A-206ENST00000597254 ERICH2A1L162 156 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 FAM196BA6NMK8 535 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 TBC1D12O60347 775 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 LARGE1O95461 756 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 TSPY3P0CV98 308 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 TSPY8P0CW00 308 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 LIFRP42702 1097 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 EVCP57679 992 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 MAP3K10Q02779 954 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 WTAPQ15007 396 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 ME3Q16798 604 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 LDLRAD1Q5T700 205 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 TATDN1Q6P1N9 297 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 TMTC2Q8N394 836 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 NEDD1Q8NHV4 660 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 UBAC1Q9BSL1 405 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
SH2D3A-206ENST00000597254 TNKSO95271 1327 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 AKR1B1P15121 316 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 CUL4AQ13619 759 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 CERKLQ49MI3 558 aaPredicted RBP13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 MIGA2Q7L4E1 593 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 SGMS1Q86VZ5 419 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 ANKS1AQ92625 1134 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 ZNF274Q96GC6 653 aaPredicted RBP13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 SH2B1Q9NRF2 756 aaPredicted RBP13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
SH2D3A-206ENST00000597254 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 NMT2O60551 498 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 PDIA3P30101 505 aaKnown RBP13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 IREB2P48200 963 aaKnown RBP13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 TM4SF4P48230 202 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 NBPF12Q5TAG4 269 aaPredicted RBP13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 SPRYD7Q5W111 196 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 DGKHQ86XP1 1220 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 NECAB1Q8N987 351 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
SH2D3A-206ENST00000597254 IGKV6D-41A0A0C4DH26 115 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 UNCXA6NJT0 531 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 PFKFB2O60825 505 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 STK3Q13188 491 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 IFIT1BQ5T764 474 aaKnown RBP13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 RCSD1Q6JBY9 416 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 SLKQ9H2G2 1235 aaPredicted RBP13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 NAP1L2Q9ULW6 460 aaPredicted RBP13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 MYH8P13535 1937 aa13.43□□□□□ -0.26
SH2D3A-206ENST00000597254 MANSC4A6NHS7 340 aaPredicted RBP13.42□□□□□ -0.26
SH2D3A-206ENST00000597254 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
SH2D3A-206ENST00000597254 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms