RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 A0A1W2PRG0 241 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 INHAP05111 366 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 PRPF38BQ5VTL8 546 aaKnown RBP18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 KBTBD3Q8NAB2 608 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 SHISA4Q96DD7 197 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 KIAA1683Q9H0B3 1180 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 KIAA0100Q14667 2235 aaKnown RBP18.74■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 AKR1B1P15121 316 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 VCAM1P19320 739 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP14P54578 494 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 IRF5Q13568 498 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 C12orf60Q5U649 245 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 CTR9Q6PD62 1173 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 OSBP2Q969R2 916 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 C12orf42Q96LP6 360 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 GJD2Q9UKL4 321 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 DDX60LQ5H9U9 1706 aaKnown RBP18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 NAV1Q8NEY1 1877 aa18.73■□□□□ 0.59
PPFIA4-208ENST00000597023 MGAMO43451 1857 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 CYP2B6P20813 491 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 CDK8P49336 464 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 CATSPERGQ6ZRH7 1159 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 PXYLP1Q8TE99 480 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 STRBPQ96SI9 672 aaKnown RBP18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 PORCNQ9H237 461 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 RPAP3Q9H6T3 665 aaPredicted RBP18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 SWAP70Q9UH65 585 aa18.72■□□□□ 0.59
PPFIA4-208ENST00000597023 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 CNMDO75829 334 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 ERVK-24P63145 666 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 TRIM32Q13049 653 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 KIAA1755Q5JYT7 1200 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 PI4K2BQ8TCG2 481 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 DDRGK1Q96HY6 314 aa18.71■□□□□ 0.59
PPFIA4-208ENST00000597023 M0R2C6 588 aa18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 GJB1P08034 283 aa18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 TMEM179Q6ZVK1 233 aa18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 C16orf86Q6ZW13 317 aa18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 CCAR1Q8IX12 1150 aaKnown RBP18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 APPBP2Q92624 585 aa18.7■□□□□ 0.58
PPFIA4-208ENST00000597023 GSG1L2A8MUP6 293 aa18.69■□□□□ 0.58
PPFIA4-208ENST00000597023 GJA8P48165 433 aa18.69■□□□□ 0.58
PPFIA4-208ENST00000597023 U2AF1L4Q8WU68 220 aaKnown RBP18.69■□□□□ 0.58
PPFIA4-208ENST00000597023 SEC62Q99442 399 aaKnown RBP18.69■□□□□ 0.58
PPFIA4-208ENST00000597023 TTC41PQ6P2S7 1318 aa18.69■□□□□ 0.58
PPFIA4-208ENST00000597023 RBBP6Q7Z6E9 1792 aaKnown RBP18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 MINDY4BA8MYZ0 360 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 ERC2O15083 957 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 GPAA1O43292 621 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 MX1P20591 662 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 ATP2B2Q01814 1243 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 ICA1Q05084 483 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 WDR78Q5VTH9 848 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 SPICE1Q8N0Z3 855 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 DEFB118Q96PH6 123 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 NUDT12Q9BQG2 462 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 BTBD7Q9P203 1132 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 ZBTB47Q9UFB7 747 aaPredicted RBP18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 RABGAP1Q9Y3P9 1069 aa18.68■□□□□ 0.58
PPFIA4-208ENST00000597023 SPDYE16A6NNV3 312 aaPredicted RBP18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 GLRX3O76003 335 aaKnown RBP18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 SGPL1O95470 568 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 APPP05067 770 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 MAPK4P31152 587 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 GTF3C2Q8WUA4 911 aaPredicted RBP18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 TRIB2Q92519 343 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 FSD1Q9BTV5 496 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 CWC22Q9HCG8 908 aaKnown RBP18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 EPB41L4AQ9HCS5 686 aaPredicted RBP18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 DOCK3Q8IZD9 2030 aa18.67■□□□□ 0.58
PPFIA4-208ENST00000597023 TFRCP02786 760 aaKnown RBP18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 HMGCRP04035 888 aa18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 PLEKHH3Q7Z736 793 aa18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 CCDC17Q96LX7 622 aa18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 ARPP21Q9UBL0 812 aaPredicted RBP18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
PPFIA4-208ENST00000597023 RAD21O60216 631 aa18.65■□□□□ 0.58
PPFIA4-208ENST00000597023 EEF2P13639 858 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms