RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 TMEM179Q6ZVK1 233 aa17.86■□□□□ 0.45
SCN1B-204ENST00000596348 PROCA1Q8NCQ7 364 aaPredicted RBP17.86■□□□□ 0.45
SCN1B-204ENST00000596348 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCN1B-204ENST00000596348 AGTPBP1Q9UPW5 1226 aa17.86■□□□□ 0.45
SCN1B-204ENST00000596348 ZMYM6O95789 1325 aa17.86■□□□□ 0.45
SCN1B-204ENST00000596348 ADGRA2Q96PE1 1338 aa17.86■□□□□ 0.45
SCN1B-204ENST00000596348 A0A1W2PRG0 241 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 CYP2C8P10632 490 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 MFAP1P55081 439 aaKnown RBP17.85■□□□□ 0.45
SCN1B-204ENST00000596348 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 MKNK2Q9HBH9 465 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 ZFYVE28Q9HCC9 887 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 EMILIN3Q9NT22 766 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 ANAPC4Q9UJX5 808 aa17.85■□□□□ 0.45
SCN1B-204ENST00000596348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCN1B-204ENST00000596348 LAMA4Q16363 1823 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
SCN1B-204ENST00000596348 BMP2KLQ5H9B9 411 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 FEZ1Q99689 392 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 NBPF3Q9H094 633 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 KIAA1683Q9H0B3 1180 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 SLC45A1Q9Y2W3 748 aa17.84■□□□□ 0.45
SCN1B-204ENST00000596348 RAD50Q92878 1312 aa17.83■□□□□ 0.44
SCN1B-204ENST00000596348 TLR2O60603 784 aa17.83■□□□□ 0.44
SCN1B-204ENST00000596348 CAP1Q01518 475 aa17.83■□□□□ 0.44
SCN1B-204ENST00000596348 ICA1Q05084 483 aa17.83■□□□□ 0.44
SCN1B-204ENST00000596348 TMOD4Q9NZQ9 345 aa17.83■□□□□ 0.44
SCN1B-204ENST00000596348 HTTP42858 3142 aa17.83■□□□□ 0.44
SCN1B-204ENST00000596348 ZSWIM8A7E2V4 1837 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 FKTNO75072 461 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 HAND2P61296 217 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 PDE4BQ07343 736 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 USP17L2Q6R6M4 530 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 C12orf42Q96LP6 360 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
SCN1B-204ENST00000596348 DSCC1Q9BVC3 393 aa17.82■□□□□ 0.44
SCN1B-204ENST00000596348 IGKV6D-41A0A0C4DH26 115 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 SGSM2O43147 1006 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
SCN1B-204ENST00000596348 KIAA1755Q5JYT7 1200 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 C17orf99Q6UX52 265 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 TBC1D10CQ8IV04 446 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 ASCC2Q9H1I8 757 aaPredicted RBP17.81■□□□□ 0.44
SCN1B-204ENST00000596348 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 CPA4Q9UI42 421 aa17.81■□□□□ 0.44
SCN1B-204ENST00000596348 PLIN4Q96Q06 1357 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 MYH4Q9Y623 1939 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 FGRP09769 529 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 EEF2P13639 858 aaKnown RBP17.8■□□□□ 0.44
SCN1B-204ENST00000596348 VCAM1P19320 739 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 FAM47AQ5JRC9 791 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
SCN1B-204ENST00000596348 RUFY2Q8WXA3 655 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 TMX2Q9Y320 296 aa17.8■□□□□ 0.44
SCN1B-204ENST00000596348 ORC4O43929 436 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 BCRP11274 1271 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 HOXA7P31268 230 aaPredicted RBP17.79■□□□□ 0.44
SCN1B-204ENST00000596348 USP14P54578 494 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 SP3Q02447 781 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 PTH1RQ03431 593 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 NEDD1Q8NHV4 660 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 CD99L2Q8TCZ2 262 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 ARHGEF10LQ9HCE6 1279 aa17.79■□□□□ 0.44
SCN1B-204ENST00000596348 TFAP4Q01664 338 aa17.78■□□□□ 0.44
SCN1B-204ENST00000596348 ATP2B2Q01814 1243 aa17.78■□□□□ 0.44
SCN1B-204ENST00000596348 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCN1B-204ENST00000596348 SMCR8Q8TEV9 937 aaPredicted RBP17.78■□□□□ 0.44
SCN1B-204ENST00000596348 CEP95Q96GE4 821 aa17.78■□□□□ 0.44
SCN1B-204ENST00000596348 PNMA3Q9UL41 463 aa17.78■□□□□ 0.44
SCN1B-204ENST00000596348 RLFQ13129 1914 aa17.78■□□□□ 0.44
SCN1B-204ENST00000596348 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 IRX3P78415 501 aaPredicted RBP17.77■□□□□ 0.44
SCN1B-204ENST00000596348 AKNAD1Q5T1N1 836 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 POTEEQ6S8J3 1075 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 CTU1Q7Z7A3 348 aaKnown RBP17.77■□□□□ 0.44
SCN1B-204ENST00000596348 TNS4Q8IZW8 715 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 STAG1Q8WVM7 1258 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.44
SCN1B-204ENST00000596348 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 ARHGAP39Q9C0H5 1083 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 VCPKMTQ9H867 229 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 MTMR4Q9NYA4 1195 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 NYAP2Q9P242 653 aa17.77■□□□□ 0.44
SCN1B-204ENST00000596348 NEDD4P46934 1319 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
SCN1B-204ENST00000596348 NMT2O60551 498 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 OSBPP22059 807 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 CTGFP29279 349 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 LACTBP83111 547 aaPredicted RBP17.76■□□□□ 0.43
SCN1B-204ENST00000596348 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 ERO1AQ96HE7 468 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 RPAP3Q9H6T3 665 aaPredicted RBP17.76■□□□□ 0.43
SCN1B-204ENST00000596348 SH2D4AQ9H788 454 aa17.76■□□□□ 0.43
SCN1B-204ENST00000596348 IL17RBQ9NRM6 502 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms