RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 TMOD4Q9NZQ9 345 aa21.74■■□□□ 1.07
ZNF558-204ENST00000596172 ATAD5Q96QE3 1844 aa21.73■■□□□ 1.07
ZNF558-204ENST00000596172 RASA1P20936 1047 aa21.73■■□□□ 1.07
ZNF558-204ENST00000596172 CHMLP26374 656 aa21.73■■□□□ 1.07
ZNF558-204ENST00000596172 USP14P54578 494 aa21.73■■□□□ 1.07
ZNF558-204ENST00000596172 PDE4BQ07343 736 aa21.73■■□□□ 1.07
ZNF558-204ENST00000596172 PABPC4Q13310 644 aaKnown RBP eCLIP21.73■■□□□ 1.07
ZNF558-204ENST00000596172 C12orf42Q96LP6 360 aa21.73■■□□□ 1.07
ZNF558-204ENST00000596172 HOXA7P31268 230 aaPredicted RBP21.72■■□□□ 1.07
ZNF558-204ENST00000596172 BMP2KLQ5H9B9 411 aa21.72■■□□□ 1.07
ZNF558-204ENST00000596172 TREML2Q5T2D2 321 aa21.72■■□□□ 1.07
ZNF558-204ENST00000596172 RUFY2Q8WXA3 655 aa21.72■■□□□ 1.07
ZNF558-204ENST00000596172 KANSL2Q9H9L4 492 aa21.72■■□□□ 1.07
ZNF558-204ENST00000596172 EMILIN3Q9NT22 766 aa21.72■■□□□ 1.07
ZNF558-204ENST00000596172 RAD50Q92878 1312 aa21.72■■□□□ 1.07
ZNF558-204ENST00000596172 FGRP09769 529 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 C17orf99Q6UX52 265 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 SIAH1Q8IUQ4 282 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 ZNF444Q8N0Y2 327 aaPredicted RBP21.71■■□□□ 1.07
ZNF558-204ENST00000596172 ACER1Q8TDN7 264 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 DSCC1Q9BVC3 393 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.71■■□□□ 1.07
ZNF558-204ENST00000596172 PNMA3Q9UL41 463 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 ADGRA2Q96PE1 1338 aa21.71■■□□□ 1.07
ZNF558-204ENST00000596172 SP3Q02447 781 aa21.7■■□□□ 1.06
ZNF558-204ENST00000596172 FEZ1Q99689 392 aa21.7■■□□□ 1.06
ZNF558-204ENST00000596172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.7■■□□□ 1.06
ZNF558-204ENST00000596172 PTPRFP10586 1907 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 A0A1W2PRG0 241 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 CYP2C8P10632 490 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 ICA1Q05084 483 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 STK11IPQ8N1F8 1099 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 SH2D4AQ9H788 454 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 ARHGEF10LQ9HCE6 1279 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 TMX2Q9Y320 296 aa21.69■■□□□ 1.06
ZNF558-204ENST00000596172 PRDM1O75626 825 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 OSBPP22059 807 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 DGKZQ13574 1117 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 SKAP1Q86WV1 359 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 NEDD1Q8NHV4 660 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 ERO1AQ96HE7 468 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 IL25Q9H293 177 aa21.68■■□□□ 1.06
ZNF558-204ENST00000596172 IGKV6D-41A0A0C4DH26 115 aa21.67■■□□□ 1.06
ZNF558-204ENST00000596172 ORC4O43929 436 aa21.67■■□□□ 1.06
ZNF558-204ENST00000596172 BCRP11274 1271 aa21.67■■□□□ 1.06
ZNF558-204ENST00000596172 PCP11498 1178 aaKnown RBP21.67■■□□□ 1.06
ZNF558-204ENST00000596172 CTDSPL2Q05D32 466 aa21.67■■□□□ 1.06
ZNF558-204ENST00000596172 CTU1Q7Z7A3 348 aaKnown RBP21.67■■□□□ 1.06
ZNF558-204ENST00000596172 ASCC2Q9H1I8 757 aaPredicted RBP21.67■■□□□ 1.06
ZNF558-204ENST00000596172 NYAP2Q9P242 653 aa21.67■■□□□ 1.06
ZNF558-204ENST00000596172 CTNNA3Q9UI47 895 aa21.67■■□□□ 1.06
ZNF558-204ENST00000596172 LOC285556D6RIA3 1793 aa21.66■■□□□ 1.06
ZNF558-204ENST00000596172 PLIN4Q96Q06 1357 aa21.66■■□□□ 1.06
ZNF558-204ENST00000596172 SGSM2O43147 1006 aa21.66■■□□□ 1.06
ZNF558-204ENST00000596172 EEF2P13639 858 aaKnown RBP21.66■■□□□ 1.06
ZNF558-204ENST00000596172 GCLCP48506 637 aaPredicted RBP21.66■■□□□ 1.06
ZNF558-204ENST00000596172 LPAR1Q92633 364 aa21.66■■□□□ 1.06
ZNF558-204ENST00000596172 CPA4Q9UI42 421 aa21.66■■□□□ 1.06
ZNF558-204ENST00000596172 CASP8AP2Q9UKL3 1982 aa21.66■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L15C9J2P7 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L13C9JLJ4 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L11C9JVI0 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L18D6R9N7 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L22D6RA61 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L17D6RBQ6 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L19D6RCP7 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L20D6RJB6 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 VCAM1P19320 739 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 NT5C2P49902 561 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 TFAP4Q01664 338 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 USP17L24Q0WX57 530 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 ARHGEF6Q15052 776 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 ZYXQ15942 572 aaKnown RBP21.65■■□□□ 1.06
ZNF558-204ENST00000596172 PKN2Q16513 984 aaKnown RBP21.65■■□□□ 1.06
ZNF558-204ENST00000596172 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 SMCR8Q8TEV9 937 aaPredicted RBP21.65■■□□□ 1.06
ZNF558-204ENST00000596172 MKL1Q969V6 931 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 SYNPO2Q9UMS6 1093 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 TACC3Q9Y6A5 838 aa21.65■■□□□ 1.06
ZNF558-204ENST00000596172 ZNF213O14771 459 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 TSPY3P0CV98 308 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 TSPY8P0CW00 308 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 IRX3P78415 501 aaPredicted RBP21.64■■□□□ 1.05
ZNF558-204ENST00000596172 PPP4R3BQ5MIZ7 849 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 CATSPERGQ6ZRH7 1159 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 CLEC10AQ8IUN9 316 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 STAG1Q8WVM7 1258 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 VCPKMTQ9H867 229 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 INCENPQ9NQS7 918 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 MTMR4Q9NYA4 1195 aa21.64■■□□□ 1.05
ZNF558-204ENST00000596172 LACTBP83111 547 aaPredicted RBP21.63■■□□□ 1.05
ZNF558-204ENST00000596172 AKNAD1Q5T1N1 836 aa21.63■■□□□ 1.05
ZNF558-204ENST00000596172 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
ZNF558-204ENST00000596172 GTF3C2Q8WUA4 911 aaPredicted RBP21.63■■□□□ 1.05
ZNF558-204ENST00000596172 P2RX7Q99572 595 aaKnown RBP21.63■■□□□ 1.05
ZNF558-204ENST00000596172 NBPF3Q9H094 633 aa21.63■■□□□ 1.05
ZNF558-204ENST00000596172 RNF41Q9H4P4 317 aaPredicted RBP21.63■■□□□ 1.05
ZNF558-204ENST00000596172 TTLL1O95922 423 aa21.62■■□□□ 1.05
ZNF558-204ENST00000596172 HAND2P61296 217 aa21.62■■□□□ 1.05
ZNF558-204ENST00000596172 KIF22Q14807 665 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms