RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FEZ1Q99689 392 aa17.03■□□□□ 0.32
LIG1-208ENST00000595758 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIG1-208ENST00000595758 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
LIG1-208ENST00000595758 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
LIG1-208ENST00000595758 ORC4O43929 436 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 TSPY3P0CV98 308 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 TSPY8P0CW00 308 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 TFAP4Q01664 338 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 ICA1Q05084 483 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.32
LIG1-208ENST00000595758 MAP4K1Q92918 833 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 NBPF3Q9H094 633 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.32
LIG1-208ENST00000595758 ZCCHC17Q9NP64 241 aaKnown RBP17.02■□□□□ 0.32
LIG1-208ENST00000595758 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 TMOD4Q9NZQ9 345 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 TSKSQ9UJT2 592 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.32
LIG1-208ENST00000595758 MYH8P13535 1937 aa17.02■□□□□ 0.31
LIG1-208ENST00000595758 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
LIG1-208ENST00000595758 TBC1D8O95759 1140 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
LIG1-208ENST00000595758 CTCFP49711 727 aaPredicted RBP17.01■□□□□ 0.31
LIG1-208ENST00000595758 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
LIG1-208ENST00000595758 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 CLEC10AQ8IUN9 316 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 SIAH1Q8IUQ4 282 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 NEDD1Q8NHV4 660 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
LIG1-208ENST00000595758 KIAA1683Q9H0B3 1180 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 PCNTO95613 3336 aa17.01■□□□□ 0.31
LIG1-208ENST00000595758 A0A1W2PRG0 241 aa17■□□□□ 0.31
LIG1-208ENST00000595758 TSPY2A6NKD2 308 aa17■□□□□ 0.31
LIG1-208ENST00000595758 PDHXO00330 501 aa17■□□□□ 0.31
LIG1-208ENST00000595758 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
LIG1-208ENST00000595758 USP14P54578 494 aa17■□□□□ 0.31
LIG1-208ENST00000595758 DGKZQ13574 1117 aa17■□□□□ 0.31
LIG1-208ENST00000595758 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
LIG1-208ENST00000595758 ZYXQ15942 572 aaKnown RBP17■□□□□ 0.31
LIG1-208ENST00000595758 SH2D4AQ9H788 454 aa17■□□□□ 0.31
LIG1-208ENST00000595758 EMILIN3Q9NT22 766 aa17■□□□□ 0.31
LIG1-208ENST00000595758 AGTPBP1Q9UPW5 1226 aa17■□□□□ 0.31
LIG1-208ENST00000595758 IGKV6D-41A0A0C4DH26 115 aa16.99■□□□□ 0.31
LIG1-208ENST00000595758 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
LIG1-208ENST00000595758 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
LIG1-208ENST00000595758 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
LIG1-208ENST00000595758 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
LIG1-208ENST00000595758 SLC45A1Q9Y2W3 748 aa16.99■□□□□ 0.31
LIG1-208ENST00000595758 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
LIG1-208ENST00000595758 CYP21A2P08686 494 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 PABPC4Q13310 644 aaKnown RBP eCLIP16.98■□□□□ 0.31
LIG1-208ENST00000595758 CRHR2Q13324 411 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 C12orf42Q96LP6 360 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 MTMR4Q9NYA4 1195 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 NYAP2Q9P242 653 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
LIG1-208ENST00000595758 NT5C2P49902 561 aa16.97■□□□□ 0.31
LIG1-208ENST00000595758 LBX1P52954 281 aa16.97■□□□□ 0.31
LIG1-208ENST00000595758 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
LIG1-208ENST00000595758 ESR2Q92731 530 aa16.97■□□□□ 0.31
LIG1-208ENST00000595758 PARK7Q99497 189 aaKnown RBP16.97■□□□□ 0.31
LIG1-208ENST00000595758 CLIP2Q9UDT6 1046 aa16.97■□□□□ 0.31
LIG1-208ENST00000595758 PTPRFP10586 1907 aa16.97■□□□□ 0.31
LIG1-208ENST00000595758 NEDD4P46934 1319 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 TTLL1O95922 423 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 OSBPP22059 807 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 KRT23Q9C075 422 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 CNNM2Q9H8M5 875 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 PNMA3Q9UL41 463 aa16.96■□□□□ 0.31
LIG1-208ENST00000595758 GPR25O00155 361 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 NMT2O60551 498 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 TLR2O60603 784 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 KDM4AO75164 1064 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 CYP2C8P10632 490 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 VCAM1P19320 739 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 HOXA7P31268 230 aaPredicted RBP16.95■□□□□ 0.3
LIG1-208ENST00000595758 LPAR1Q92633 364 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 MKL1Q969V6 931 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
LIG1-208ENST00000595758 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
LIG1-208ENST00000595758 LAMA4Q16363 1823 aa16.94■□□□□ 0.3
LIG1-208ENST00000595758 B4E1Z4 1266 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms