RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 PRDM1O75626 825 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 HSPD1P10809 573 aaKnown RBP24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 SIAH1Q8IUQ4 282 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 LOC285556D6RIA3 1793 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 HIP1O00291 1037 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 RASA1P20936 1047 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 TMEM179Q6ZVK1 233 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 CD99L2Q8TCZ2 262 aa24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.82■■□□□ 1.56
SH2D3A-204ENST00000595681 SP3Q02447 781 aa24.81■■□□□ 1.56
SH2D3A-204ENST00000595681 PPARAQ07869 468 aa24.81■■□□□ 1.56
SH2D3A-204ENST00000595681 C17orf99Q6UX52 265 aa24.81■■□□□ 1.56
SH2D3A-204ENST00000595681 PARK7Q99497 189 aaKnown RBP24.81■■□□□ 1.56
SH2D3A-204ENST00000595681 SLC45A1Q9Y2W3 748 aa24.81■■□□□ 1.56
SH2D3A-204ENST00000595681 HTTP42858 3142 aa24.81■■□□□ 1.56
SH2D3A-204ENST00000595681 C19orf81C9J6K1 198 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 CTDSPL2Q05D32 466 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 CCDC17Q96LX7 622 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 FEZ1Q99689 392 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 MCOLN1Q9GZU1 580 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 INCENPQ9NQS7 918 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 TACC3Q9Y6A5 838 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 FGAP02671 866 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 CHMLP26374 656 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 MKNK2Q9HBH9 465 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 TMOD4Q9NZQ9 345 aa24.8■■□□□ 1.56
SH2D3A-204ENST00000595681 ECM2O94769 699 aaPredicted RBP24.79■■□□□ 1.56
SH2D3A-204ENST00000595681 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
SH2D3A-204ENST00000595681 CTU1Q7Z7A3 348 aaKnown RBP24.79■■□□□ 1.56
SH2D3A-204ENST00000595681 KIAA1683Q9H0B3 1180 aa24.79■■□□□ 1.56
SH2D3A-204ENST00000595681 ALX1Q15699 326 aa24.78■■□□□ 1.56
SH2D3A-204ENST00000595681 USP17L2Q6R6M4 530 aa24.78■■□□□ 1.56
SH2D3A-204ENST00000595681 ARHGAP39Q9C0H5 1083 aa24.78■■□□□ 1.56
SH2D3A-204ENST00000595681 ICA1Q05084 483 aa24.77■■□□□ 1.56
SH2D3A-204ENST00000595681 ASCC2Q9H1I8 757 aaPredicted RBP24.77■■□□□ 1.56
SH2D3A-204ENST00000595681 MFAP1P55081 439 aaKnown RBP24.77■■□□□ 1.56
SH2D3A-204ENST00000595681 HAND2P61296 217 aa24.77■■□□□ 1.56
SH2D3A-204ENST00000595681 KIAA1755Q5JYT7 1200 aa24.77■■□□□ 1.56
SH2D3A-204ENST00000595681 C12orf42Q96LP6 360 aa24.77■■□□□ 1.56
SH2D3A-204ENST00000595681 BCRP11274 1271 aa24.76■■□□□ 1.55
SH2D3A-204ENST00000595681 CTGFP29279 349 aa24.76■■□□□ 1.55
SH2D3A-204ENST00000595681 SMCR8Q8TEV9 937 aaPredicted RBP24.76■■□□□ 1.55
SH2D3A-204ENST00000595681 VCAM1P19320 739 aa24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 OTOP1Q7RTM1 612 aa24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 ERO1AQ96HE7 468 aa24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 EEF2P13639 858 aaKnown RBP24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 HOXA7P31268 230 aaPredicted RBP24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 LACTBP83111 547 aaPredicted RBP24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 ANAPC4Q9UJX5 808 aa24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 TRIM17Q9Y577 477 aa24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 ZSWIM8A7E2V4 1837 aa24.75■■□□□ 1.55
SH2D3A-204ENST00000595681 CENPFP49454 3210 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 PEX10O60683 326 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 USP14P54578 494 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 ATP2B2Q01814 1243 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 BMP2KLQ5H9B9 411 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 FAM47AQ5JRC9 791 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 ZNF444Q8N0Y2 327 aaPredicted RBP24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 P2RX7Q99572 595 aaKnown RBP24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 NBPF3Q9H094 633 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 KANSL2Q9H9L4 492 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 PNMA3Q9UL41 463 aa24.74■■□□□ 1.55
SH2D3A-204ENST00000595681 PDE4BQ07343 736 aa24.73■■□□□ 1.55
SH2D3A-204ENST00000595681 PABPC4Q13310 644 aaKnown RBP eCLIP24.73■■□□□ 1.55
SH2D3A-204ENST00000595681 POTEEQ6S8J3 1075 aa24.73■■□□□ 1.55
SH2D3A-204ENST00000595681 ANKRD13CQ8N6S4 541 aa24.73■■□□□ 1.55
SH2D3A-204ENST00000595681 TMX2Q9Y320 296 aa24.73■■□□□ 1.55
SH2D3A-204ENST00000595681 GREB1LQ9C091 1923 aaPredicted RBP24.73■■□□□ 1.55
SH2D3A-204ENST00000595681 ZMYM6O95789 1325 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 IGKV6D-41A0A0C4DH26 115 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 SLC3A2P08195 630 aaKnown RBP24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 OSBPP22059 807 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 ABHD8Q96I13 439 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 IRX3P78415 501 aaPredicted RBP24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 SPICE1Q8N0Z3 855 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 RUFY2Q8WXA3 655 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 EFCC1Q9HA90 598 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 ZNF287Q9HBT7 754 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 ARHGEF10LQ9HCE6 1279 aa24.72■■□□□ 1.55
SH2D3A-204ENST00000595681 NKX2-3Q8TAU0 364 aa24.71■■□□□ 1.55
SH2D3A-204ENST00000595681 RPAP3Q9H6T3 665 aaPredicted RBP24.71■■□□□ 1.55
SH2D3A-204ENST00000595681 RAD50Q92878 1312 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 TFAP4Q01664 338 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 TBC1D10CQ8IV04 446 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 CEP95Q96GE4 821 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 TRIM47Q96LD4 638 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 DSCC1Q9BVC3 393 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 TOMM22Q9NS69 142 aa24.7■■□□□ 1.55
SH2D3A-204ENST00000595681 SGSM2O43147 1006 aa24.7■■□□□ 1.54
SH2D3A-204ENST00000595681 HERVK_113P62684 666 aa24.7■■□□□ 1.54
SH2D3A-204ENST00000595681 PTH1RQ03431 593 aa24.7■■□□□ 1.54
SH2D3A-204ENST00000595681 TXNRD2Q9NNW7 524 aa24.7■■□□□ 1.54
SH2D3A-204ENST00000595681 FGRP09769 529 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 TSPY3P0CV98 308 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 TSPY8P0CW00 308 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 PSMC4P43686 418 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 RRP12Q5JTH9 1297 aaKnown RBP24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 CATSPERGQ6ZRH7 1159 aa24.69■■□□□ 1.54
SH2D3A-204ENST00000595681 NEDD1Q8NHV4 660 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms