RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 USP17L11C9JVI0 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 USP17L18D6R9N7 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 USP17L22D6RA61 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 USP17L17D6RBQ6 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 USP17L19D6RCP7 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 USP17L20D6RJB6 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 USP17L24Q0WX57 530 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 TSHZ3Q63HK5 1081 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 AMOTL1Q8IY63 956 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 KBTBD3Q8NAB2 608 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 SLC44A5Q8NCS7 719 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 GTF3C2Q8WUA4 911 aaPredicted RBP28.26■■■□□ 2.11
LSM4-204ENST00000594828 DYNLL2Q96FJ2 89 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 TXNRD2Q9NNW7 524 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 RBPJLQ9UBG7 517 aa28.26■■■□□ 2.11
LSM4-204ENST00000594828 PEX10O60683 326 aa28.25■■■□□ 2.11
LSM4-204ENST00000594828 GJB1P08034 283 aa28.25■■■□□ 2.11
LSM4-204ENST00000594828 GJD2Q9UKL4 321 aa28.25■■■□□ 2.11
LSM4-204ENST00000594828 USP17L12C9JPN9 530 aa28.24■■■□□ 2.11
LSM4-204ENST00000594828 USP17L21D6R901 530 aa28.24■■■□□ 2.11
LSM4-204ENST00000594828 C12orf60Q5U649 245 aa28.24■■■□□ 2.11
LSM4-204ENST00000594828 UNC93B1Q9H1C4 597 aa28.24■■■□□ 2.11
LSM4-204ENST00000594828 CYP2D7A0A087X1C5 515 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 INHAP05111 366 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 GJA8P48165 433 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 CATSPERGQ6ZRH7 1159 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 TMEM179Q6ZVK1 233 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 CRBNQ96SW2 442 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 PAGR1Q9BTK6 254 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 MYH7P12883 1935 aa28.23■■■□□ 2.11
LSM4-204ENST00000594828 VCAM1P19320 739 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 ERVK-9P63128 1117 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 ERVK-24P63145 666 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 Q3C1V9 767 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 DOCK3Q8IZD9 2030 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 SHISA4Q96DD7 197 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 BRCA2P51587 3418 aa28.22■■■□□ 2.11
LSM4-204ENST00000594828 TTC41PQ6P2S7 1318 aa28.21■■■□□ 2.11
LSM4-204ENST00000594828 CCAR1Q8IX12 1150 aaKnown RBP28.21■■■□□ 2.11
LSM4-204ENST00000594828 STRBPQ96SI9 672 aaKnown RBP28.21■■■□□ 2.11
LSM4-204ENST00000594828 A0A1W2PRG0 241 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 SMIM22K7EJ46 135 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 ERC2O15083 957 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 RNF113AO15541 343 aaKnown RBP28.2■■■□□ 2.1
LSM4-204ENST00000594828 MAPK4P31152 587 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 CDK8P49336 464 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 CTR9Q6PD62 1173 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 POTEEQ6S8J3 1075 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 APPBP2Q92624 585 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 CCDC17Q96LX7 622 aa28.2■■■□□ 2.1
LSM4-204ENST00000594828 RPAP3Q9H6T3 665 aaPredicted RBP28.2■■■□□ 2.1
LSM4-204ENST00000594828 ZFYP08048 801 aaPredicted RBP28.19■■■□□ 2.1
LSM4-204ENST00000594828 AKR1B1P15121 316 aa28.19■■■□□ 2.1
LSM4-204ENST00000594828 C16orf86Q6ZW13 317 aa28.19■■■□□ 2.1
LSM4-204ENST00000594828 U2AF1L4Q8WU68 220 aaKnown RBP28.19■■■□□ 2.1
LSM4-204ENST00000594828 OSBP2Q969R2 916 aa28.19■■■□□ 2.1
LSM4-204ENST00000594828 RABGAP1Q9Y3P9 1069 aa28.19■■■□□ 2.1
LSM4-204ENST00000594828 BAZ2AQ9UIF9 1905 aaKnown RBP28.19■■■□□ 2.1
LSM4-204ENST00000594828 SGPL1O95470 568 aa28.18■■■□□ 2.1
LSM4-204ENST00000594828 OTUD7AQ8TE49 926 aaPredicted RBP28.18■■■□□ 2.1
LSM4-204ENST00000594828 NUDT12Q9BQG2 462 aa28.18■■■□□ 2.1
LSM4-204ENST00000594828 PORCNQ9H237 461 aa28.18■■■□□ 2.1
LSM4-204ENST00000594828 GLRX3O76003 335 aaKnown RBP28.17■■■□□ 2.1
LSM4-204ENST00000594828 LRRFIP1Q32MZ4 808 aaKnown RBP28.17■■■□□ 2.1
LSM4-204ENST00000594828 ARPP21Q9UBL0 812 aaPredicted RBP28.17■■■□□ 2.1
LSM4-204ENST00000594828 ZBTB47Q9UFB7 747 aaPredicted RBP28.17■■■□□ 2.1
LSM4-204ENST00000594828 MKI67P46013 3256 aaKnown RBP28.17■■■□□ 2.1
LSM4-204ENST00000594828 HMGCRP04035 888 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 CYP2B6P20813 491 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 CCNA1P78396 465 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 GIMAP6Q6P9H5 292 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 LBX2Q6XYB7 198 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 PI4K2BQ8TCG2 481 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 SOCS4Q8WXH5 440 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 ARHGEF10LQ9HCE6 1279 aa28.16■■■□□ 2.1
LSM4-204ENST00000594828 GSG1L2A8MUP6 293 aa28.15■■■□□ 2.1
LSM4-204ENST00000594828 CNMDO75829 334 aa28.15■■■□□ 2.1
LSM4-204ENST00000594828 ICA1Q05084 483 aa28.15■■■□□ 2.1
LSM4-204ENST00000594828 GPR142Q7Z601 462 aa28.15■■■□□ 2.1
LSM4-204ENST00000594828 SIAH1Q8IUQ4 282 aa28.15■■■□□ 2.1
LSM4-204ENST00000594828 DEFB118Q96PH6 123 aa28.15■■■□□ 2.1
LSM4-204ENST00000594828 CWC22Q9HCG8 908 aaKnown RBP28.15■■■□□ 2.1
LSM4-204ENST00000594828 PAK6Q9NQU5 681 aaPredicted RBP28.15■■■□□ 2.1
LSM4-204ENST00000594828 MX1P20591 662 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 COG2Q14746 738 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 SBK1Q52WX2 424 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 ANKRD45Q5TZF3 282 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 PLEKHH3Q7Z736 793 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 CLEC10AQ8IUN9 316 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 SH2D4AQ9H788 454 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 HOXC10Q9NYD6 342 aa28.14■■■□□ 2.1
LSM4-204ENST00000594828 SPDYE16A6NNV3 312 aaPredicted RBP28.13■■■□□ 2.09
LSM4-204ENST00000594828 GPAA1O43292 621 aa28.13■■■□□ 2.09
LSM4-204ENST00000594828 TFRCP02786 760 aaKnown RBP28.13■■■□□ 2.09
LSM4-204ENST00000594828 XRCC5P13010 732 aaKnown RBP28.13■■■□□ 2.09
LSM4-204ENST00000594828 CAPN2P17655 700 aa28.13■■■□□ 2.09
LSM4-204ENST00000594828 TANGO6Q9C0B7 1094 aa28.13■■■□□ 2.09
LSM4-204ENST00000594828 TMX2Q9Y320 296 aa28.13■■■□□ 2.09
LSM4-204ENST00000594828 MYH8P13535 1937 aa28.12■■■□□ 2.09
LSM4-204ENST00000594828 GNAT2P19087 354 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms