RNA–Protein interactions for RNA: ENST00000593699.5

LRMDA-209, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 1 (best)

Gene LRMDA, Length 1,124 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-209ENST00000593699 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 CCL5P13501 91 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 MAPK4P31152 587 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 CCNA1P78396 465 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 GABPAQ06546 454 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 AAMPQ13685 434 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 GABRQQ9UN88 632 aa13.16□□□□□ -0.3
LRMDA-209ENST00000593699 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
LRMDA-209ENST00000593699 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
LRMDA-209ENST00000593699 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
LRMDA-209ENST00000593699 INHAP05111 366 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 CAPN2P17655 700 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 VCAM1P19320 739 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 SEPT2Q15019 361 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 APPBP2Q92624 585 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 CCDC17Q96LX7 622 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
LRMDA-209ENST00000593699 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
LRMDA-209ENST00000593699 PRKAB2O43741 272 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 HMGCRP04035 888 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 GJB1P08034 283 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 CYP2D6P10635 497 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 ELNP15502 786 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 GNAT2P19087 354 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 MX1P20591 662 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 ERVK-24P63145 666 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 ICA1Q05084 483 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
LRMDA-209ENST00000593699 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
LRMDA-209ENST00000593699 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 TANGO6Q9C0B7 1094 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
LRMDA-209ENST00000593699 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 USP17L21D6R901 530 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 TDO2P48775 406 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 MTFR1Q15390 333 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 C16orf86Q6ZW13 317 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 LPAR1Q92633 364 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 PUS7LQ9H0K6 701 aaKnown RBP13.13□□□□□ -0.31
LRMDA-209ENST00000593699 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
LRMDA-209ENST00000593699 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 RABGAP1Q9Y3P9 1069 aa13.13□□□□□ -0.31
LRMDA-209ENST00000593699 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
LRMDA-209ENST00000593699 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
LRMDA-209ENST00000593699 GJA8P48165 433 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 A0A0G2JMZ2 1700 aa13.12□□□□□ -0.31
LRMDA-209ENST00000593699 GPAA1O43292 621 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
LRMDA-209ENST00000593699 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 RGS2P41220 211 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 CDK8P49336 464 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
LRMDA-209ENST00000593699 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 CATSPERGQ6ZRH7 1159 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 PLEKHH3Q7Z736 793 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 U2AF1L4Q8WU68 220 aaKnown RBP13.11□□□□□ -0.31
LRMDA-209ENST00000593699 SHISA4Q96DD7 197 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 STRBPQ96SI9 672 aaKnown RBP13.11□□□□□ -0.31
LRMDA-209ENST00000593699 APBA2Q99767 749 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 HTATIP2Q9BUP3 242 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 TXNRD2Q9NNW7 524 aa13.11□□□□□ -0.31
LRMDA-209ENST00000593699 CENPFP49454 3210 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 CYP2D7A0A087X1C5 515 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
LRMDA-209ENST00000593699 FARP2O94887 1054 aaPredicted RBP13.1□□□□□ -0.31
LRMDA-209ENST00000593699 APPP05067 770 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
LRMDA-209ENST00000593699 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
LRMDA-209ENST00000593699 AKR1B1P15121 316 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 ATP2B2Q01814 1243 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 EVX2Q03828 476 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 SBK1Q52WX2 424 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 GPR142Q7Z601 462 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
LRMDA-209ENST00000593699 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■■□ 22.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms