RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ACER1Q8TDN7 264 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 PANK1Q8TE04 598 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 GDF15Q99988 308 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 IL1RAPL2Q9NP60 686 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 PFASO15067 1338 aa19.91■□□□□ 0.78
LIG1-205ENST00000593425 CCND3P30281 292 aaPredicted RBP19.9■□□□□ 0.78
LIG1-205ENST00000593425 SHMT1P34896 483 aa19.9■□□□□ 0.78
LIG1-205ENST00000593425 RGS2P41220 211 aa19.9■□□□□ 0.78
LIG1-205ENST00000593425 ABCB5Q2M3G0 1257 aa19.9■□□□□ 0.78
LIG1-205ENST00000593425 CERKLQ49MI3 558 aaPredicted RBP19.9■□□□□ 0.78
LIG1-205ENST00000593425 TTC6Q86TZ1 520 aa19.9■□□□□ 0.78
LIG1-205ENST00000593425 CCAR1Q8IX12 1150 aaKnown RBP19.9■□□□□ 0.78
LIG1-205ENST00000593425 LRCH3Q96II8 777 aa19.9■□□□□ 0.78
LIG1-205ENST00000593425 APBA2Q99767 749 aa19.9■□□□□ 0.78
LIG1-205ENST00000593425 USP17L15C9J2P7 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L13C9JLJ4 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L11C9JVI0 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L18D6R9N7 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L22D6RA61 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L17D6RBQ6 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L19D6RCP7 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L20D6RJB6 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 SYN1P17600 705 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 VCAM1P19320 739 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 EVX2Q03828 476 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 USP17L24Q0WX57 530 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 CATSPERGQ6ZRH7 1159 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 ERC1Q8IUD2 1116 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
LIG1-205ENST00000593425 KIAA1683Q9H0B3 1180 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 RABGAP1Q9Y3P9 1069 aa19.89■□□□□ 0.77
LIG1-205ENST00000593425 GUCY1A2P33402 732 aa19.88■□□□□ 0.77
LIG1-205ENST00000593425 USP14P54578 494 aa19.88■□□□□ 0.77
LIG1-205ENST00000593425 MAGEB6P1A0A0J9YX57 407 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 BMP8BP34820 402 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 GABPAQ06546 454 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 MAP2K5Q13163 448 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 LHX8Q68G74 356 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 TMED8Q6PL24 325 aaPredicted RBP19.87■□□□□ 0.77
LIG1-205ENST00000593425 MIER1Q8N108 512 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 RHPN1Q8TCX5 695 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 CWC22Q9HCG8 908 aaKnown RBP19.87■□□□□ 0.77
LIG1-205ENST00000593425 BTBD7Q9P203 1132 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 A0A0G2JMZ2 1700 aa19.87■□□□□ 0.77
LIG1-205ENST00000593425 MYH8P13535 1937 aa19.86■□□□□ 0.77
LIG1-205ENST00000593425 SPDYE16A6NNV3 312 aaPredicted RBP19.86■□□□□ 0.77
LIG1-205ENST00000593425 COL6A1P12109 1028 aa19.86■□□□□ 0.77
LIG1-205ENST00000593425 PDE6AP16499 860 aa19.86■□□□□ 0.77
LIG1-205ENST00000593425 RPAP3Q9H6T3 665 aaPredicted RBP19.86■□□□□ 0.77
LIG1-205ENST00000593425 CABP5Q9NP86 173 aa19.86■□□□□ 0.77
LIG1-205ENST00000593425 FLRT1Q9NZU1 646 aa19.86■□□□□ 0.77
LIG1-205ENST00000593425 RLFQ13129 1914 aa19.86■□□□□ 0.77
LIG1-205ENST00000593425 ZNF532Q9HCE3 1301 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 POLR3DP05423 398 aaPredicted RBP19.85■□□□□ 0.77
LIG1-205ENST00000593425 PTPREP23469 700 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 MAGEA10P43363 369 aaPredicted RBP19.85■□□□□ 0.77
LIG1-205ENST00000593425 CCNA1P78396 465 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 SEPT2Q15019 361 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 TTF1Q15361 905 aaPredicted RBP19.85■□□□□ 0.77
LIG1-205ENST00000593425 SLC9C2Q5TAH2 1124 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 WDR78Q5VTH9 848 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 LBX2Q6XYB7 198 aa19.85■□□□□ 0.77
LIG1-205ENST00000593425 EDC3Q96F86 508 aaKnown RBP19.85■□□□□ 0.77
LIG1-205ENST00000593425 ZNF236Q9UL36 1845 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 A0A1W2PRG0 241 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 APBB1O00213 710 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 HSP90AB4PQ58FF6 505 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 LCORLQ8N3X6 602 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 SDR42E1Q8WUS8 393 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 DNAJC2Q99543 621 aaKnown RBP19.84■□□□□ 0.77
LIG1-205ENST00000593425 CRNKL1Q9BZJ0 848 aaKnown RBP19.84■□□□□ 0.77
LIG1-205ENST00000593425 MCM9Q9NXL9 1143 aa19.84■□□□□ 0.77
LIG1-205ENST00000593425 BAZ2AQ9UIF9 1905 aaKnown RBP19.83■□□□□ 0.77
LIG1-205ENST00000593425 TCRBV5S4A2TA0A5A2 114 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 SLC15A5A6NIM6 579 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 GOLIM4O00461 696 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 CYP2D6P10635 497 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 GRB14Q14449 540 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 LRRC26Q2I0M4 334 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 NPLOC4Q8TAT6 608 aa19.83■□□□□ 0.77
LIG1-205ENST00000593425 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
LIG1-205ENST00000593425 LAMA3Q16787 3333 aa19.82■□□□□ 0.76
LIG1-205ENST00000593425 PARP14Q460N5 1801 aa19.82■□□□□ 0.76
LIG1-205ENST00000593425 MPHOSPH10O00566 681 aaKnown RBP19.82■□□□□ 0.76
LIG1-205ENST00000593425 GLRX3O76003 335 aaKnown RBP19.82■□□□□ 0.76
LIG1-205ENST00000593425 CLASRPQ8N2M8 674 aaKnown RBP19.82■□□□□ 0.76
LIG1-205ENST00000593425 SLC44A5Q8NCS7 719 aa19.82■□□□□ 0.76
LIG1-205ENST00000593425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.82■□□□□ 0.76
LIG1-205ENST00000593425 KIF1BPQ96EK5 621 aa19.82■□□□□ 0.76
LIG1-205ENST00000593425 DCP1AQ9NPI6 582 aaPredicted RBP19.82■□□□□ 0.76
LIG1-205ENST00000593425 HOXC6P09630 235 aa19.81■□□□□ 0.76
LIG1-205ENST00000593425 SLFNL1Q499Z3 407 aa19.81■□□□□ 0.76
LIG1-205ENST00000593425 MFSD14CQ5VZR4 134 aa19.81■□□□□ 0.76
LIG1-205ENST00000593425 SIRT2Q8IXJ6 389 aa19.81■□□□□ 0.76
LIG1-205ENST00000593425 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
LIG1-205ENST00000593425 IVNS1ABPQ9Y6Y0 642 aa19.81■□□□□ 0.76
LIG1-205ENST00000593425 MYH7P12883 1935 aa19.8■□□□□ 0.76
LIG1-205ENST00000593425 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
LIG1-205ENST00000593425 CLEC10AQ8IUN9 316 aa19.8■□□□□ 0.76
LIG1-205ENST00000593425 TDHQ8IZJ6 230 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms