RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 USP17L4A6NCW7 530 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 C21orf2O43822 256 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 WDHD1O75717 1129 aaPredicted RBP13.8□□□□□ -0.2
NPC1-214ENST00000593280 CRKP46108 304 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
NPC1-214ENST00000593280 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 USP17L1Q7RTZ2 530 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
NPC1-214ENST00000593280 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 PNMA1Q8ND90 353 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 MAP3K14Q99558 947 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 KCNJ14Q9UNX9 436 aa13.8□□□□□ -0.2
NPC1-214ENST00000593280 SPTLC2O15270 562 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 NR1I2O75469 434 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 KIAA0825Q8IV33 1275 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 NOSTRINQ8IVI9 506 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 DIS3L2Q8IYB7 885 aaKnown RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 TNMDQ9H2S6 317 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 FOXP1Q9H334 677 aaPredicted RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 PCDHA7Q9UN72 937 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 A0A1W2PQ27 194 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 A0A1W2PQ64 194 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 PPIP5K2O43314 1243 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 HDLBPQ00341 1268 aaKnown RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 GRM4Q14833 912 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 PKN1Q16512 942 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 APOBEC3HQ6NTF7 200 aaKnown RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
NPC1-214ENST00000593280 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 V9GY48 417 aaPredicted RBP13.79□□□□□ -0.2
NPC1-214ENST00000593280 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 BTBD18B2RXH4 712 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 CAMK4Q16566 473 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 FSIP1Q8NA03 581 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
NPC1-214ENST00000593280 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 OSBPL5Q9H0X9 879 aaPredicted RBP13.78□□□□□ -0.2
NPC1-214ENST00000593280 GOLPH3LQ9H4A5 285 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
NPC1-214ENST00000593280 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 HLA-DOAP06340 250 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 DPEP1P16444 411 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 GNAQP50148 359 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 RBM5P52756 815 aaKnown RBP eCLIP13.77□□□□□ -0.21
NPC1-214ENST00000593280 FAM160A1Q05DH4 1040 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 FUCA2Q9BTY2 467 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
NPC1-214ENST00000593280 GOLGB1Q14789 3259 aaKnown RBP13.76□□□□□ -0.21
NPC1-214ENST00000593280 MYO3BQ8WXR4 1341 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 KINO60870 393 aaKnown RBP13.76□□□□□ -0.21
NPC1-214ENST00000593280 SCG2P13521 617 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 KRT2P35908 639 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 GABPAQ06546 454 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 RBM43Q6ZSC3 357 aaKnown RBP13.76□□□□□ -0.21
NPC1-214ENST00000593280 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 PSMD1Q99460 953 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 PHF20Q9BVI0 1012 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 SIPA1L1O43166 1804 aa13.76□□□□□ -0.21
NPC1-214ENST00000593280 PPP6R2O75170 966 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
NPC1-214ENST00000593280 RILPL1Q5EBL4 403 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 MAD2L2Q9UI95 211 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
NPC1-214ENST00000593280 YDJCA8MPS7 323 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 CTAGE5O15320 804 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 KCNA3P22001 575 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 NR5A1Q13285 461 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 SNW1Q13573 536 aaKnown RBP13.75□□□□□ -0.21
NPC1-214ENST00000593280 PTPAQ15257 358 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 PFKFB3Q16875 520 aaPredicted RBP13.75□□□□□ -0.21
NPC1-214ENST00000593280 SOGA3Q5TF21 947 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 CKAP2LQ8IYA6 745 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 ENGASEQ8NFI3 743 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 OXER1Q8TDS5 423 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
NPC1-214ENST00000593280 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
NPC1-214ENST00000593280 NOVP48745 357 aa13.74□□□□□ -0.21
NPC1-214ENST00000593280 NFIAQ12857 509 aa13.74□□□□□ -0.21
NPC1-214ENST00000593280 AXDND1Q5T1B0 1012 aaPredicted RBP13.74□□□□□ -0.21
NPC1-214ENST00000593280 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms