RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 CEP85Q6P2H3 762 aa21.29■■□□□ 1
RETREG3-212ENST00000593251 GTF3C2Q8WUA4 911 aaPredicted RBP21.29■■□□□ 1
RETREG3-212ENST00000593251 CWC22Q9HCG8 908 aaKnown RBP21.29■■□□□ 1
RETREG3-212ENST00000593251 CERKLQ49MI3 558 aaPredicted RBP21.28■■□□□ 1
RETREG3-212ENST00000593251 AACSQ86V21 672 aa21.28■■□□□ 1
RETREG3-212ENST00000593251 TRMT44Q8IYL2 757 aaKnown RBP21.28■■□□□ 1
RETREG3-212ENST00000593251 ACER1Q8TDN7 264 aa21.28■■□□□ 1
RETREG3-212ENST00000593251 C12orf42Q96LP6 360 aa21.28■■□□□ 1
RETREG3-212ENST00000593251 COL6A3P12111 3177 aa21.28■■□□□ 1
RETREG3-212ENST00000593251 USP17L15C9J2P7 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L13C9JLJ4 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L11C9JVI0 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L18D6R9N7 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L22D6RA61 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L17D6RBQ6 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L19D6RCP7 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L20D6RJB6 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 PLCD1P51178 756 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 USP17L24Q0WX57 530 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 MAP3K12Q12852 859 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 ABCB5Q2M3G0 1257 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 WDR78Q5VTH9 848 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 TTC6Q86TZ1 520 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 APBA2Q99767 749 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 EHD4Q9H223 541 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 RABGAP1Q9Y3P9 1069 aa21.27■■□□□ 1
RETREG3-212ENST00000593251 DNAH12Q6ZR08 3092 aa21.27■□□□□ 0.99
RETREG3-212ENST00000593251 BMP8BP34820 402 aa21.26■□□□□ 0.99
RETREG3-212ENST00000593251 SHMT1P34896 483 aa21.26■□□□□ 0.99
RETREG3-212ENST00000593251 MAGEA10P43363 369 aaPredicted RBP21.26■□□□□ 0.99
RETREG3-212ENST00000593251 LHX8Q68G74 356 aa21.26■□□□□ 0.99
RETREG3-212ENST00000593251 CATSPERGQ6ZRH7 1159 aa21.26■□□□□ 0.99
RETREG3-212ENST00000593251 CERS3Q8IU89 383 aa21.26■□□□□ 0.99
RETREG3-212ENST00000593251 IL1RAPL2Q9NP60 686 aa21.26■□□□□ 0.99
RETREG3-212ENST00000593251 VCAM1P19320 739 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 USP14P54578 494 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 EVX2Q03828 476 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 MAP2K5Q13163 448 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 RIOK1Q9BRS2 568 aaKnown RBP21.25■□□□□ 0.99
RETREG3-212ENST00000593251 KIAA1683Q9H0B3 1180 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 CABP5Q9NP86 173 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 FLRT1Q9NZU1 646 aa21.25■□□□□ 0.99
RETREG3-212ENST00000593251 BAZ2AQ9UIF9 1905 aaKnown RBP21.24■□□□□ 0.99
RETREG3-212ENST00000593251 MAGEB6P1A0A0J9YX57 407 aa21.24■□□□□ 0.99
RETREG3-212ENST00000593251 GUCY1A2P33402 732 aa21.24■□□□□ 0.99
RETREG3-212ENST00000593251 CCNA1P78396 465 aa21.24■□□□□ 0.99
RETREG3-212ENST00000593251 PANK1Q8TE04 598 aa21.24■□□□□ 0.99
RETREG3-212ENST00000593251 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
RETREG3-212ENST00000593251 BTBD7Q9P203 1132 aa21.24■□□□□ 0.99
RETREG3-212ENST00000593251 RLFQ13129 1914 aa21.23■□□□□ 0.99
RETREG3-212ENST00000593251 POLR3DP05423 398 aaPredicted RBP21.23■□□□□ 0.99
RETREG3-212ENST00000593251 COL6A1P12109 1028 aa21.23■□□□□ 0.99
RETREG3-212ENST00000593251 SEPT2Q15019 361 aa21.23■□□□□ 0.99
RETREG3-212ENST00000593251 LRRC26Q2I0M4 334 aa21.23■□□□□ 0.99
RETREG3-212ENST00000593251 ERC1Q8IUD2 1116 aa21.23■□□□□ 0.99
RETREG3-212ENST00000593251 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
RETREG3-212ENST00000593251 RPAP3Q9H6T3 665 aaPredicted RBP21.23■□□□□ 0.99
RETREG3-212ENST00000593251 SPDYE16A6NNV3 312 aaPredicted RBP21.22■□□□□ 0.99
RETREG3-212ENST00000593251 APBB1O00213 710 aa21.22■□□□□ 0.99
RETREG3-212ENST00000593251 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
RETREG3-212ENST00000593251 PTPREP23469 700 aa21.22■□□□□ 0.99
RETREG3-212ENST00000593251 SLC15A5A6NIM6 579 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 PDE6AP16499 860 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 SLC17A8Q8NDX2 589 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 NPLOC4Q8TAT6 608 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 UBE2OQ9C0C9 1292 aaKnown RBP21.21■□□□□ 0.99
RETREG3-212ENST00000593251 MCM9Q9NXL9 1143 aa21.21■□□□□ 0.99
RETREG3-212ENST00000593251 A0A1W2PRG0 241 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 MPHOSPH10O00566 681 aaKnown RBP21.2■□□□□ 0.98
RETREG3-212ENST00000593251 GABPAQ06546 454 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 MFSD14CQ5VZR4 134 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 LBX2Q6XYB7 198 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 Q7L0L9 218 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 TDHQ8IZJ6 230 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 DNAJC2Q99543 621 aaKnown RBP21.2■□□□□ 0.98
RETREG3-212ENST00000593251 CRNKL1Q9BZJ0 848 aaKnown RBP21.2■□□□□ 0.98
RETREG3-212ENST00000593251 IVNS1ABPQ9Y6Y0 642 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 ZNF532Q9HCE3 1301 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 A0A0G2JMZ2 1700 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 PARP14Q460N5 1801 aa21.2■□□□□ 0.98
RETREG3-212ENST00000593251 MYH7P12883 1935 aa21.19■□□□□ 0.98
RETREG3-212ENST00000593251 ZNFX1Q9P2E3 1918 aaKnown RBP21.19■□□□□ 0.98
RETREG3-212ENST00000593251 GOLIM4O00461 696 aa21.19■□□□□ 0.98
RETREG3-212ENST00000593251 CYP2D6P10635 497 aa21.19■□□□□ 0.98
RETREG3-212ENST00000593251 CNGA1P29973 690 aa21.19■□□□□ 0.98
RETREG3-212ENST00000593251 ATP2B2Q01814 1243 aa21.19■□□□□ 0.98
RETREG3-212ENST00000593251 TTF1Q15361 905 aaPredicted RBP21.19■□□□□ 0.98
RETREG3-212ENST00000593251 TMED8Q6PL24 325 aaPredicted RBP21.19■□□□□ 0.98
RETREG3-212ENST00000593251 SDR42E1Q8WUS8 393 aa21.19■□□□□ 0.98
RETREG3-212ENST00000593251 COL11A1P12107 1806 aaPredicted RBP21.18■□□□□ 0.98
RETREG3-212ENST00000593251 ZNF236Q9UL36 1845 aa21.18■□□□□ 0.98
RETREG3-212ENST00000593251 CYP2C19P33261 490 aa21.18■□□□□ 0.98
RETREG3-212ENST00000593251 MDM2Q00987 491 aaPredicted RBP21.18■□□□□ 0.98
RETREG3-212ENST00000593251 GRB14Q14449 540 aa21.18■□□□□ 0.98
RETREG3-212ENST00000593251 LCORLQ8N3X6 602 aa21.18■□□□□ 0.98
RETREG3-212ENST00000593251 DEFB123Q8N688 67 aa21.18■□□□□ 0.98
RETREG3-212ENST00000593251 SLC44A5Q8NCS7 719 aa21.18■□□□□ 0.98
RETREG3-212ENST00000593251 LRIT3Q3SXY7 679 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms