RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 DEXIO95424 95 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 TUBBP07437 444 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 HSP90B2PQ58FF3 399 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 CCDC102AQ96A19 550 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 PAGE5Q96GU1 130 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 CABP5Q9NP86 173 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 KCPQ6ZWJ8 1503 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 ERVK-24P63145 666 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 FOXR1Q6PIV2 292 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 SH3RF1Q7Z6J0 888 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 CCDC82Q8N4S0 544 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 ZFP91Q96JP5 570 aaPredicted RBP20.38■□□□□ 0.85
SPC24-206ENST00000592540 EFCC1Q9HA90 598 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 EPB41L4AQ9HCS5 686 aaPredicted RBP20.38■□□□□ 0.85
SPC24-206ENST00000592540 AATFQ9NY61 560 aaKnown RBP eCLIP20.38■□□□□ 0.85
SPC24-206ENST00000592540 MYO1AQ9UBC5 1043 aa20.38■□□□□ 0.85
SPC24-206ENST00000592540 PPP1R3GB7ZBB8 358 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 PCCAP05165 728 aaPredicted RBP20.37■□□□□ 0.85
SPC24-206ENST00000592540 CASP1P29466 404 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 ARHGAP25P42331 645 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 IFNL3Q8IZI9 196 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 CRACR2BQ8N4Y2 399 aaPredicted RBP20.37■□□□□ 0.85
SPC24-206ENST00000592540 NOA1Q8NC60 698 aaKnown RBP20.37■□□□□ 0.85
SPC24-206ENST00000592540 EPSTI1Q96J88 318 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 PATL2C9JE40 543 aaKnown RBP20.37■□□□□ 0.85
SPC24-206ENST00000592540 LDHAL6AQ6ZMR3 332 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 SMYD4Q8IYR2 804 aaPredicted RBP20.37■□□□□ 0.85
SPC24-206ENST00000592540 CMTR1Q8N1G2 835 aaKnown RBP20.37■□□□□ 0.85
SPC24-206ENST00000592540 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
SPC24-206ENST00000592540 LRRIQ3A6PVS8 624 aaPredicted RBP20.36■□□□□ 0.85
SPC24-206ENST00000592540 NAPBQ9H115 298 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 AMPD2Q01433 879 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 DPYDQ12882 1025 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
SPC24-206ENST00000592540 CHRNA2Q15822 529 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 AKNAD1Q5T1N1 836 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 GSDMAQ96QA5 445 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 KRT23Q9C075 422 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 MED4Q9NPJ6 270 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 ABHD10Q9NUJ1 306 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 MYO6Q9UM54 1294 aa20.36■□□□□ 0.85
SPC24-206ENST00000592540 TIAM2Q8IVF5 1701 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 PHACTR2O75167 634 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 WDR93Q6P2C0 686 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 CYP26C1Q6V0L0 522 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 ZKSCAN3Q9BRR0 538 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 ACBD3Q9H3P7 528 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 MKRN1Q9UHC7 482 aaKnown RBP20.35■□□□□ 0.85
SPC24-206ENST00000592540 CCT6AP40227 531 aaKnown RBP20.35■□□□□ 0.85
SPC24-206ENST00000592540 WTAPQ15007 396 aa20.35■□□□□ 0.85
SPC24-206ENST00000592540 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
SPC24-206ENST00000592540 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
SPC24-206ENST00000592540 RNF225M0QZC1 329 aaPredicted RBP20.34■□□□□ 0.85
SPC24-206ENST00000592540 NOP2P46087 812 aaKnown RBP20.34■□□□□ 0.85
SPC24-206ENST00000592540 KRT31Q15323 416 aa20.34■□□□□ 0.85
SPC24-206ENST00000592540 NOM1Q5C9Z4 860 aaKnown RBP20.34■□□□□ 0.85
SPC24-206ENST00000592540 NCAPH2Q6IBW4 605 aa20.34■□□□□ 0.85
SPC24-206ENST00000592540 MFSD6Q6ZSS7 791 aa20.34■□□□□ 0.85
SPC24-206ENST00000592540 ZBTB38Q8NAP3 1195 aaPredicted RBP20.34■□□□□ 0.85
SPC24-206ENST00000592540 TTLL11Q8NHH1 800 aa20.34■□□□□ 0.85
SPC24-206ENST00000592540 PHKA1P46020 1223 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 RRP12Q5JTH9 1297 aaKnown RBP20.33■□□□□ 0.85
SPC24-206ENST00000592540 LRRC31Q6UY01 552 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 SYMPKQ92797 1274 aaKnown RBP20.33■□□□□ 0.85
SPC24-206ENST00000592540 CNNM1Q9NRU3 951 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 LIMA1Q9UHB6 759 aaKnown RBP20.33■□□□□ 0.85
SPC24-206ENST00000592540 CTNND2Q9UQB3 1225 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 MYH13Q9UKX3 1938 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 BCL9LQ86UU0 1499 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 PAPPAQ13219 1627 aa20.33■□□□□ 0.85
SPC24-206ENST00000592540 CCDC196A0A1B0GTZ2 297 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 FAM205CA6NFA0 338 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 N4BP3O15049 544 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 ITGA6P23229 1130 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 CDC25AP30304 524 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 SART3Q15020 963 aaKnown RBP20.33■□□□□ 0.84
SPC24-206ENST00000592540 SYNE4Q8N205 404 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 SLF1Q9BQI6 1058 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 FAM204AQ9H8W3 233 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 MYH2Q9UKX2 1941 aa20.33■□□□□ 0.84
SPC24-206ENST00000592540 LRRC10BA6NIK2 292 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 MBD4O95243 580 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 ARID4AP29374 1257 aaPredicted RBP20.32■□□□□ 0.84
SPC24-206ENST00000592540 PLCD3Q8N3E9 789 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 GOLGA6L1Q8N7Z2 621 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 CABLES1Q8TDN4 633 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 NUP88Q99567 741 aaPredicted RBP20.32■□□□□ 0.84
SPC24-206ENST00000592540 GREM2Q9H772 168 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 VIPAS39Q9H9C1 493 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 ZNF330Q9Y3S2 320 aaPredicted RBP20.32■□□□□ 0.84
SPC24-206ENST00000592540 ERVV-2B6SEH9 535 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 FANCBQ8NB91 859 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 TOMM22Q9NS69 142 aa20.32■□□□□ 0.84
SPC24-206ENST00000592540 MYH3P11055 1940 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 COBLO75128 1261 aa20.31■□□□□ 0.84
SPC24-206ENST00000592540 MAGEA9P43362 315 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms