RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ADGRA2Q96PE1 1338 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 NAPBQ9H115 298 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
VMP1-211ENST00000591315 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 TLR2O60603 784 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 HSPD1P10809 573 aaKnown RBP13.76□□□□□ -0.21
VMP1-211ENST00000591315 SH3D19Q5HYK7 790 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 ARHGAP39Q9C0H5 1083 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 MCOLN1Q9GZU1 580 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 CABP5Q9NP86 173 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 DIAPH3Q9NSV4 1193 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 AGTPBP1Q9UPW5 1226 aa13.76□□□□□ -0.21
VMP1-211ENST00000591315 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 FGAP02671 866 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 CTGFP29279 349 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 HAND2P61296 217 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 PPARAQ07869 468 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 NOM1Q5C9Z4 860 aaKnown RBP13.75□□□□□ -0.21
VMP1-211ENST00000591315 C17orf99Q6UX52 265 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
VMP1-211ENST00000591315 ZCCHC17Q9NP64 241 aaKnown RBP13.75□□□□□ -0.21
VMP1-211ENST00000591315 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 CHMLP26374 656 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 SP3Q02447 781 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 ALX1Q15699 326 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 FAM47AQ5JRC9 791 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 USP17L2Q6R6M4 530 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
VMP1-211ENST00000591315 FEZ1Q99689 392 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 ASCC2Q9H1I8 757 aaPredicted RBP13.74□□□□□ -0.21
VMP1-211ENST00000591315 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 CENPFP49454 3210 aa13.74□□□□□ -0.21
VMP1-211ENST00000591315 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
VMP1-211ENST00000591315 BCRP11274 1271 aa13.73□□□□□ -0.21
VMP1-211ENST00000591315 EEF2P13639 858 aaKnown RBP13.73□□□□□ -0.21
VMP1-211ENST00000591315 ATP2B2Q01814 1243 aa13.73□□□□□ -0.21
VMP1-211ENST00000591315 CTU1Q7Z7A3 348 aaKnown RBP13.73□□□□□ -0.21
VMP1-211ENST00000591315 TICAM2Q86XR7 235 aa13.73□□□□□ -0.21
VMP1-211ENST00000591315 CCDC17Q96LX7 622 aa13.73□□□□□ -0.21
VMP1-211ENST00000591315 PARK7Q99497 189 aaKnown RBP13.73□□□□□ -0.21
VMP1-211ENST00000591315 P2RX7Q99572 595 aaKnown RBP13.73□□□□□ -0.21
VMP1-211ENST00000591315 KIAA1683Q9H0B3 1180 aa13.73□□□□□ -0.21
VMP1-211ENST00000591315 TMOD4Q9NZQ9 345 aa13.73□□□□□ -0.21
VMP1-211ENST00000591315 C19orf81C9J6K1 198 aa13.72□□□□□ -0.21
VMP1-211ENST00000591315 ICA1Q05084 483 aa13.72□□□□□ -0.21
VMP1-211ENST00000591315 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
VMP1-211ENST00000591315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
VMP1-211ENST00000591315 SLC45A1Q9Y2W3 748 aa13.72□□□□□ -0.21
VMP1-211ENST00000591315 TRIM17Q9Y577 477 aa13.72□□□□□ -0.21
VMP1-211ENST00000591315 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 HIP1O00291 1037 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 NMT2O60551 498 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 CAPN15O75808 1086 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 VCAM1P19320 739 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 PTH1RQ03431 593 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 SPICE1Q8N0Z3 855 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 C12orf42Q96LP6 360 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 ANAPC4Q9UJX5 808 aa13.71□□□□□ -0.21
VMP1-211ENST00000591315 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
VMP1-211ENST00000591315 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
VMP1-211ENST00000591315 TFAP4Q01664 338 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 ZNF444Q8N0Y2 327 aaPredicted RBP13.7□□□□□ -0.22
VMP1-211ENST00000591315 SMCR8Q8TEV9 937 aaPredicted RBP13.7□□□□□ -0.22
VMP1-211ENST00000591315 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 CEP95Q96GE4 821 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 ERO1AQ96HE7 468 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
VMP1-211ENST00000591315 EFCC1Q9HA90 598 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 TXNRD2Q9NNW7 524 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 MYH4Q9Y623 1939 aa13.7□□□□□ -0.22
VMP1-211ENST00000591315 RLFQ13129 1914 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 OSBPP22059 807 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 PSMC4P43686 418 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 USP14P54578 494 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 HERVK_113P62684 666 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
VMP1-211ENST00000591315 PDE4BQ07343 736 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
VMP1-211ENST00000591315 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
VMP1-211ENST00000591315 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 TMX2Q9Y320 296 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
VMP1-211ENST00000591315 MGAMO43451 1857 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms