RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PORCNQ9H237 461 aa26.4■■□□□ 1.82
DDX39A-215ENST00000590696 CABP5Q9NP86 173 aa26.4■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L15C9J2P7 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L13C9JLJ4 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L11C9JVI0 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L18D6R9N7 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L22D6RA61 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L17D6RBQ6 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L19D6RCP7 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L20D6RJB6 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 SHMT1P34896 483 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP14P54578 494 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 USP17L24Q0WX57 530 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 PDE3AQ14432 1141 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 NECAB2Q7Z6G3 386 aa26.39■■□□□ 1.82
DDX39A-215ENST00000590696 DIS3LQ8TF46 1054 aaKnown RBP26.39■■□□□ 1.82
DDX39A-215ENST00000590696 CRNKL1Q9BZJ0 848 aaKnown RBP26.39■■□□□ 1.82
DDX39A-215ENST00000590696 ZNF532Q9HCE3 1301 aa26.39■■□□□ 1.81
DDX39A-215ENST00000590696 XRCC5P13010 732 aaKnown RBP26.38■■□□□ 1.81
DDX39A-215ENST00000590696 GPR142Q7Z601 462 aa26.38■■□□□ 1.81
DDX39A-215ENST00000590696 ANKLE1Q8NAG6 615 aa26.38■■□□□ 1.81
DDX39A-215ENST00000590696 ACER1Q8TDN7 264 aa26.38■■□□□ 1.81
DDX39A-215ENST00000590696 KIAA1683Q9H0B3 1180 aa26.38■■□□□ 1.81
DDX39A-215ENST00000590696 RAB11FIP3O75154 756 aa26.37■■□□□ 1.81
DDX39A-215ENST00000590696 CATSPERGQ6ZRH7 1159 aa26.37■■□□□ 1.81
DDX39A-215ENST00000590696 PLEKHH3Q7Z736 793 aa26.37■■□□□ 1.81
DDX39A-215ENST00000590696 MCM9Q9NXL9 1143 aa26.37■■□□□ 1.81
DDX39A-215ENST00000590696 RABGAP1Q9Y3P9 1069 aa26.37■■□□□ 1.81
DDX39A-215ENST00000590696 DDX60LQ5H9U9 1706 aaKnown RBP26.36■■□□□ 1.81
DDX39A-215ENST00000590696 NAV1Q8NEY1 1877 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 TCRBV5S4A2TA0A5A2 114 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 PRKAR2AP13861 404 aaKnown RBP26.36■■□□□ 1.81
DDX39A-215ENST00000590696 EVX2Q03828 476 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 GABPAQ06546 454 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 MAP3K21Q5TCX8 1036 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 USP6NLQ92738 828 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 EDC3Q96F86 508 aaKnown RBP26.36■■□□□ 1.81
DDX39A-215ENST00000590696 PRO3102Q9H379 93 aa26.36■■□□□ 1.81
DDX39A-215ENST00000590696 CNMDO75829 334 aa26.35■■□□□ 1.81
DDX39A-215ENST00000590696 VCAM1P19320 739 aa26.35■■□□□ 1.81
DDX39A-215ENST00000590696 GUCY1A2P33402 732 aa26.35■■□□□ 1.81
DDX39A-215ENST00000590696 MORN1Q5T089 497 aa26.35■■□□□ 1.81
DDX39A-215ENST00000590696 TRMT44Q8IYL2 757 aaKnown RBP26.35■■□□□ 1.81
DDX39A-215ENST00000590696 LCORLQ8N3X6 602 aa26.35■■□□□ 1.81
DDX39A-215ENST00000590696 SDR42E1Q8WUS8 393 aa26.35■■□□□ 1.81
DDX39A-215ENST00000590696 CWC22Q9HCG8 908 aaKnown RBP26.35■■□□□ 1.81
DDX39A-215ENST00000590696 ZKSCAN1P17029 563 aaPredicted RBP26.34■■□□□ 1.81
DDX39A-215ENST00000590696 RGS2P41220 211 aa26.34■■□□□ 1.81
DDX39A-215ENST00000590696 SEPT2Q15019 361 aa26.34■■□□□ 1.81
DDX39A-215ENST00000590696 DCP1AQ9NPI6 582 aaPredicted RBP26.34■■□□□ 1.81
DDX39A-215ENST00000590696 CACNB2Q08289 660 aaPredicted RBP26.33■■□□□ 1.81
DDX39A-215ENST00000590696 CCL14Q16627 93 aa26.33■■□□□ 1.81
DDX39A-215ENST00000590696 BOLA2Q9H3K6 86 aa26.33■■□□□ 1.81
DDX39A-215ENST00000590696 CHMP4BQ9H444 224 aaKnown RBP26.33■■□□□ 1.81
DDX39A-215ENST00000590696 PAG1Q9NWQ8 432 aa26.33■■□□□ 1.81
DDX39A-215ENST00000590696 OGDHLQ9ULD0 1010 aa26.33■■□□□ 1.81
DDX39A-215ENST00000590696 TRIOBPQ9H2D6 2365 aa26.33■■□□□ 1.81
DDX39A-215ENST00000590696 MPHOSPH10O00566 681 aaKnown RBP26.32■■□□□ 1.8
DDX39A-215ENST00000590696 MNX1P50219 401 aaPredicted RBP26.32■■□□□ 1.8
DDX39A-215ENST00000590696 CCNA1P78396 465 aa26.32■■□□□ 1.8
DDX39A-215ENST00000590696 NBPF3Q9H094 633 aa26.32■■□□□ 1.8
DDX39A-215ENST00000590696 RPAP3Q9H6T3 665 aaPredicted RBP26.32■■□□□ 1.8
DDX39A-215ENST00000590696 ARMT1Q9H993 441 aa26.32■■□□□ 1.8
DDX39A-215ENST00000590696 ALPK3Q96L96 1907 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 CYP2D6P10635 497 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 SLFNL1Q499Z3 407 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 LBX2Q6XYB7 198 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 APBA2Q99767 749 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 BTBD7Q9P203 1132 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 RCAN3Q9UKA8 241 aa26.31■■□□□ 1.8
DDX39A-215ENST00000590696 GLRX3O76003 335 aaKnown RBP26.3■■□□□ 1.8
DDX39A-215ENST00000590696 ATP5JP18859 108 aa26.3■■□□□ 1.8
DDX39A-215ENST00000590696 ADD2P35612 726 aa26.3■■□□□ 1.8
DDX39A-215ENST00000590696 MAP2K5Q13163 448 aa26.3■■□□□ 1.8
DDX39A-215ENST00000590696 WDR78Q5VTH9 848 aa26.3■■□□□ 1.8
DDX39A-215ENST00000590696 C11orf49Q9H6J7 331 aa26.3■■□□□ 1.8
DDX39A-215ENST00000590696 A0A1W2PRG0 241 aa26.29■■□□□ 1.8
DDX39A-215ENST00000590696 SPDYE16A6NNV3 312 aaPredicted RBP26.29■■□□□ 1.8
DDX39A-215ENST00000590696 PRKAB2O43741 272 aa26.29■■□□□ 1.8
DDX39A-215ENST00000590696 CCND3P30281 292 aaPredicted RBP26.29■■□□□ 1.8
DDX39A-215ENST00000590696 SLC44A5Q8NCS7 719 aa26.29■■□□□ 1.8
DDX39A-215ENST00000590696 MBD4O95243 580 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 PTPREP23469 700 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 C7orf61Q8IZ16 206 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 DYNLL2Q96FJ2 89 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 HAUS7Q99871 368 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.28■■□□□ 1.84e-20■□□□□ 10.4
DDX39A-215ENST00000590696 STAP2Q9UGK3 403 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 SWAP70Q9UH65 585 aa26.28■■□□□ 1.8
DDX39A-215ENST00000590696 RANBP2P49792 3224 aaKnown RBP26.27■■□□□ 1.8
DDX39A-215ENST00000590696 SLC15A5A6NIM6 579 aa26.27■■□□□ 1.8
DDX39A-215ENST00000590696 ATP8A2Q9NTI2 1148 aa26.27■■□□□ 1.8
DDX39A-215ENST00000590696 LHX8Q68G74 356 aa26.26■■□□□ 1.79
DDX39A-215ENST00000590696 TMEM179Q6ZVK1 233 aa26.26■■□□□ 1.79
DDX39A-215ENST00000590696 IVNS1ABPQ9Y6Y0 642 aa26.26■■□□□ 1.79
DDX39A-215ENST00000590696 CHGBP05060 677 aa26.25■■□□□ 1.79
DDX39A-215ENST00000590696 COG2Q14746 738 aa26.25■■□□□ 1.79
DDX39A-215ENST00000590696 C20orf194Q5TEA3 1177 aa26.25■■□□□ 1.79
DDX39A-215ENST00000590696 LRRCC1Q9C099 1032 aa26.25■■□□□ 1.79
DDX39A-215ENST00000590696 HOXC10Q9NYD6 342 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms