RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 USP17L21D6R901 530 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 PRPF4BQ13523 1007 aaKnown RBP19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 SPATA1Q5VX52 437 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 USP27XA6NNY8 438 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 PRKAB2O43741 272 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 MORC3Q14149 939 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 SMC1AQ14683 1233 aaKnown RBP19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 ZNF609O15014 1411 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 KCNJ18B7U540 433 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 COBLO75128 1261 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 MMP1P03956 469 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 MCAMP43121 646 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 KCNJ12Q14500 433 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 FCHSD1Q86WN1 690 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 ZSWIM5Q9P217 1185 aa19.23■□□□□ 0.67
SMARCA4-215ENST00000590574 NR5A1Q13285 461 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 CCDC51Q96ER9 411 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 OPA1O60313 960 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 VSTM4Q8IW00 320 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 CCDC113Q9H0I3 377 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 PHLPP2Q6ZVD8 1323 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 TBCAO75347 108 aaKnown RBP19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 FOXO4P98177 505 aa19.22■□□□□ 0.67
SMARCA4-215ENST00000590574 CHRNDQ07001 517 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 IFI16Q16666 785 aaKnown RBP19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 CNNM4Q6P4Q7 775 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 MICALCLQ6ZW33 695 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 CEMIPQ8WUJ3 1361 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 NLRP10Q86W26 655 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 SLAIN2Q9P270 581 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 TECPR2O15040 1411 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 WDR17Q8IZU2 1322 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 TFAP4Q01664 338 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 TBC1D10CQ8IV04 446 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 ZBTB1Q9Y2K1 713 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 TXKP42681 527 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 ST5P78524 1137 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 ERMNQ8TAM6 284 aa19.21■□□□□ 0.67
SMARCA4-215ENST00000590574 SEC31AO94979 1220 aaKnown RBP19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 PTGDRQ13258 359 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 USPL1Q5W0Q7 1092 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 GPIHBP1Q8IV16 184 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 MB21D2Q8IYB1 491 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 NAA30Q147X3 362 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 SMYD4Q8IYR2 804 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 CCDC24Q8N4L8 307 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 CARD10Q9BWT7 1032 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 DIP2AQ14689 1571 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 ARID4AP29374 1257 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 PPP1R2P41236 205 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 FBXO38Q6PIJ6 1188 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 NUP58Q9BVL2 599 aa19.2■□□□□ 0.66
SMARCA4-215ENST00000590574 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 DNAJC21Q5F1R6 531 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 UTP14CQ5TAP6 766 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 IFT81Q8WYA0 676 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 TMOD2Q9NZR1 351 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 PLCG2P16885 1265 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 EXOSC10Q01780 885 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 BRD3Q15059 726 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 CYB5R4Q7L1T6 521 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 SAMSN1Q9NSI8 373 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 IFNAR1P17181 557 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 CASP14P31944 242 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 ATG9AQ7Z3C6 839 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 SEC31BQ9NQW1 1179 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 RBL2Q08999 1139 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 NBPF14Q5TI25 921 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 RESP18Q5W5W9 173 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 CABP7Q86V35 215 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 DHX37Q8IY37 1157 aaKnown RBP19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 TEX11Q8IYF3 940 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 AGLP35573 1532 aa19.19■□□□□ 0.66
SMARCA4-215ENST00000590574 C10orf67Q8IYJ2 551 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 ERCC5P28715 1186 aaPredicted RBP19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 TTLL11Q8NHH1 800 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 SCG2P13521 617 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 NONOQ15233 471 aaKnown RBP eCLIP19.18■□□□□ 0.669e-8■■■■□ 21.6
SMARCA4-215ENST00000590574 BLIDQ8IZY5 108 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 FAM76AQ8TAV0 307 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 TRAF5O00463 557 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 ERCC3P19447 782 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 TNIP1Q15025 636 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 INCENPQ9NQS7 918 aa19.18■□□□□ 0.66
SMARCA4-215ENST00000590574 AFAP1L1Q8TED9 768 aa19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 BPIFA3Q9BQP9 254 aa19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 NEDD4P46934 1319 aa19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 GNPATO15228 680 aa19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 SSR1P43307 286 aaKnown RBP19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 PALLDQ8WX93 1383 aa19.17■□□□□ 0.66
SMARCA4-215ENST00000590574 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms