RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ADD2P35612 726 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 GABPAQ06546 454 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 MTFR1Q15390 333 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 AMOTL1Q8IY63 956 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 P2RX7Q99572 595 aaKnown RBP9.17□□□□□ -0.94
NPC1-208ENST00000590301 BOLA2Q9H3K6 86 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 ECHDC1Q9NTX5 307 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 PDE4DIPQ5VU43 2346 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 MYH2Q9UKX2 1941 aa9.17□□□□□ -0.94
NPC1-208ENST00000590301 GLRX3O76003 335 aaKnown RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 HMGCRP04035 888 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 PLCD1P51178 756 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 CCNA1P78396 465 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 LRRFIP1Q32MZ4 808 aaKnown RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 C20orf194Q5TEA3 1177 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 LBX2Q6XYB7 198 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 CCAR1Q8IX12 1150 aaKnown RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 LCORLQ8N3X6 602 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 U2AF1L4Q8WU68 220 aaKnown RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 SHISA4Q96DD7 197 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 CCDC17Q96LX7 622 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 HTATIP2Q9BUP3 242 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 DCTPP1Q9H773 170 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 SH2D4AQ9H788 454 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 DCP1AQ9NPI6 582 aaPredicted RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 ZBTB47Q9UFB7 747 aaPredicted RBP9.16□□□□□ -0.94
NPC1-208ENST00000590301 GJD2Q9UKL4 321 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 RABGAP1Q9Y3P9 1069 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 DOCK1Q14185 1865 aa9.16□□□□□ -0.94
NPC1-208ENST00000590301 MBD4O95243 580 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 SGPL1O95470 568 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 ZFYP08048 801 aaPredicted RBP9.15□□□□□ -0.94
NPC1-208ENST00000590301 ELNP15502 786 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 VCAM1P19320 739 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 ERVK-9P63128 1117 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 ERVK-24P63145 666 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 SHROOM1Q2M3G4 852 aaPredicted RBP9.15□□□□□ -0.94
NPC1-208ENST00000590301 TMEM179Q6ZVK1 233 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 ARMT1Q9H993 441 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 PAK6Q9NQU5 681 aaPredicted RBP9.15□□□□□ -0.94
NPC1-208ENST00000590301 RBPJLQ9UBG7 517 aa9.15□□□□□ -0.94
NPC1-208ENST00000590301 MPHOSPH10O00566 681 aaKnown RBP9.14□□□□□ -0.95
NPC1-208ENST00000590301 FARP2O94887 1054 aaPredicted RBP9.14□□□□□ -0.95
NPC1-208ENST00000590301 RGS2P41220 211 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 GIMAP6Q6P9H5 292 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 CATSPERGQ6ZRH7 1159 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 PLEKHH3Q7Z736 793 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 KBTBD3Q8NAB2 608 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 ANKLE1Q8NAG6 615 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 SDR42E1Q8WUS8 393 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 LPAR1Q92633 364 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 EDC3Q96F86 508 aaKnown RBP9.14□□□□□ -0.95
NPC1-208ENST00000590301 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.14□□□□□ -0.95
NPC1-208ENST00000590301 ARHGEF10LQ9HCE6 1279 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 CWC22Q9HCG8 908 aaKnown RBP9.14□□□□□ -0.95
NPC1-208ENST00000590301 TXNRD2Q9NNW7 524 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 NR2E3Q9Y5X4 410 aa9.14□□□□□ -0.95
NPC1-208ENST00000590301 TTC41PQ6P2S7 1318 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 RPTORQ8N122 1335 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 TFRCP02786 760 aaKnown RBP9.13□□□□□ -0.95
NPC1-208ENST00000590301 GUCY1A2P33402 732 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 SEPT2Q15019 361 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
NPC1-208ENST00000590301 MAP3K21Q5TCX8 1036 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 C12orf60Q5U649 245 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 MB21D1Q8N884 522 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 ACER1Q8TDN7 264 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 USP6NLQ92738 828 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 DEFB118Q96PH6 123 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 APBA2Q99767 749 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 PAGR1Q9BTK6 254 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 BCL11AQ9H165 835 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 RPAP3Q9H6T3 665 aaPredicted RBP9.13□□□□□ -0.95
NPC1-208ENST00000590301 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
NPC1-208ENST00000590301 HOXC10Q9NYD6 342 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 ARPP21Q9UBL0 812 aaPredicted RBP9.13□□□□□ -0.95
NPC1-208ENST00000590301 SLC4A4Q9Y6R1 1079 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 LOC285556D6RIA3 1793 aa9.13□□□□□ -0.95
NPC1-208ENST00000590301 RBBP6Q7Z6E9 1792 aaKnown RBP9.13□□□□□ -0.95
NPC1-208ENST00000590301 SLC15A5A6NIM6 579 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 USP17L12C9JPN9 530 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 USP17L21D6R901 530 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 ERC2O15083 957 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 PRKAB2O43741 272 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 SMARCA5O60264 1052 aaPredicted RBP9.12□□□□□ -0.95
NPC1-208ENST00000590301 CYP2D6P10635 497 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 ZKSCAN1P17029 563 aaPredicted RBP9.12□□□□□ -0.95
NPC1-208ENST00000590301 GNAT2P19087 354 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 ICA1Q05084 483 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 AAMPQ13685 434 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 COG2Q14746 738 aa9.12□□□□□ -0.95
NPC1-208ENST00000590301 SBK1Q52WX2 424 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms