RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 SGPL1O95470 568 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 GUCY1A2P33402 732 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 ABCB5Q2M3G0 1257 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 SLFNL1Q499Z3 407 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 KBTBD3Q8NAB2 608 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 CABP5Q9NP86 173 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 CEP290O15078 2479 aa23.17■■□□□ 1.3
PDCD5-207ENST00000590247 RAB3GAP1Q15042 981 aa23.16■■□□□ 1.3
PDCD5-207ENST00000590247 Q3C1V9 767 aa23.16■■□□□ 1.3
PDCD5-207ENST00000590247 PAK6Q9NQU5 681 aaPredicted RBP23.16■■□□□ 1.3
PDCD5-207ENST00000590247 SWAP70Q9UH65 585 aa23.16■■□□□ 1.3
PDCD5-207ENST00000590247 USP14P54578 494 aa23.15■■□□□ 1.3
PDCD5-207ENST00000590247 GPRC5AQ8NFJ5 357 aa23.15■■□□□ 1.3
PDCD5-207ENST00000590247 ACER1Q8TDN7 264 aa23.15■■□□□ 1.3
PDCD5-207ENST00000590247 DDRGK1Q96HY6 314 aa23.15■■□□□ 1.3
PDCD5-207ENST00000590247 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
PDCD5-207ENST00000590247 KIAA1683Q9H0B3 1180 aa23.15■■□□□ 1.3
PDCD5-207ENST00000590247 ERC2O15083 957 aa23.14■■□□□ 1.29
PDCD5-207ENST00000590247 CHGBP05060 677 aa23.14■■□□□ 1.29
PDCD5-207ENST00000590247 ZFYP08048 801 aaPredicted RBP23.14■■□□□ 1.29
PDCD5-207ENST00000590247 ZYXQ15942 572 aaKnown RBP23.14■■□□□ 1.29
PDCD5-207ENST00000590247 AMOTL1Q8IY63 956 aa23.14■■□□□ 1.29
PDCD5-207ENST00000590247 GTF3C2Q8WUA4 911 aaPredicted RBP23.14■■□□□ 1.29
PDCD5-207ENST00000590247 CRBNQ96SW2 442 aa23.14■■□□□ 1.29
PDCD5-207ENST00000590247 PRKAB2O43741 272 aa23.13■■□□□ 1.29
PDCD5-207ENST00000590247 CYP2D6P10635 497 aa23.13■■□□□ 1.29
PDCD5-207ENST00000590247 ERVK-9P63128 1117 aa23.13■■□□□ 1.29
PDCD5-207ENST00000590247 ERVK-24P63145 666 aa23.13■■□□□ 1.29
PDCD5-207ENST00000590247 LRRFIP1Q32MZ4 808 aaKnown RBP23.13■■□□□ 1.29
PDCD5-207ENST00000590247 HABP4Q5JVS0 413 aaKnown RBP23.13■■□□□ 1.29
PDCD5-207ENST00000590247 FEZ1Q99689 392 aa23.13■■□□□ 1.29
PDCD5-207ENST00000590247 PUS7LQ9H0K6 701 aaKnown RBP23.13■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L15C9J2P7 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L13C9JLJ4 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L11C9JVI0 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L18D6R9N7 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L22D6RA61 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L17D6RBQ6 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L19D6RCP7 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L20D6RJB6 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 HMGCRP04035 888 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 CAPN2P17655 700 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L24Q0WX57 530 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 HDAC1Q13547 482 aaPredicted RBP23.12■■□□□ 1.29
PDCD5-207ENST00000590247 SEPT2Q15019 361 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 C12orf60Q5U649 245 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 CATSPERGQ6ZRH7 1159 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 DEFB118Q96PH6 123 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 PORCNQ9H237 461 aa23.12■■□□□ 1.29
PDCD5-207ENST00000590247 CNMDO75829 334 aa23.11■■□□□ 1.29
PDCD5-207ENST00000590247 GLRX3O76003 335 aaKnown RBP23.11■■□□□ 1.29
PDCD5-207ENST00000590247 VCAM1P19320 739 aa23.11■■□□□ 1.29
PDCD5-207ENST00000590247 TRIM32Q13049 653 aa23.11■■□□□ 1.29
PDCD5-207ENST00000590247 APPBP2Q92624 585 aa23.11■■□□□ 1.29
PDCD5-207ENST00000590247 PAGR1Q9BTK6 254 aa23.11■■□□□ 1.29
PDCD5-207ENST00000590247 SLC4A4Q9Y6R1 1079 aa23.11■■□□□ 1.29
PDCD5-207ENST00000590247 RLFQ13129 1914 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 H0YGN5 161 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 RNF113AO15541 343 aaKnown RBP23.1■■□□□ 1.29
PDCD5-207ENST00000590247 FARP2O94887 1054 aaPredicted RBP23.1■■□□□ 1.29
PDCD5-207ENST00000590247 MAPK4P31152 587 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 GIMAP6Q6P9H5 292 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 TMEM179Q6ZVK1 233 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 SLC44A5Q8NCS7 719 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 TRIB2Q92519 343 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 USP6NLQ92738 828 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 CCDC17Q96LX7 622 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 NUDT12Q9BQG2 462 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDCD5-207ENST00000590247 RABGAP1Q9Y3P9 1069 aa23.1■■□□□ 1.29
PDCD5-207ENST00000590247 A0A1W2PRG0 241 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L12C9JPN9 530 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 USP17L21D6R901 530 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 XRCC5P13010 732 aaKnown RBP23.09■■□□□ 1.29
PDCD5-207ENST00000590247 MX1P20591 662 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 CYP2B6P20813 491 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 TSHZ3Q63HK5 1081 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 LBX2Q6XYB7 198 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 GPR142Q7Z601 462 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 PI4K2BQ8TCG2 481 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 SOCS4Q8WXH5 440 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 DYNLL2Q96FJ2 89 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 STRBPQ96SI9 672 aaKnown RBP23.09■■□□□ 1.29
PDCD5-207ENST00000590247 ARPP21Q9UBL0 812 aaPredicted RBP23.09■■□□□ 1.29
PDCD5-207ENST00000590247 ZBTB47Q9UFB7 747 aaPredicted RBP23.09■■□□□ 1.29
PDCD5-207ENST00000590247 ALPK3Q96L96 1907 aa23.09■■□□□ 1.29
PDCD5-207ENST00000590247 GREB1LQ9C091 1923 aaPredicted RBP23.09■■□□□ 1.29
PDCD5-207ENST00000590247 SMIM22K7EJ46 135 aa23.08■■□□□ 1.29
PDCD5-207ENST00000590247 TFRCP02786 760 aaKnown RBP23.08■■□□□ 1.29
PDCD5-207ENST00000590247 MORN1Q5T089 497 aa23.08■■□□□ 1.29
PDCD5-207ENST00000590247 C16orf86Q6ZW13 317 aa23.08■■□□□ 1.29
PDCD5-207ENST00000590247 DPF3Q92784 378 aa23.08■■□□□ 1.29
PDCD5-207ENST00000590247 HTATIP2Q9BUP3 242 aa23.08■■□□□ 1.29
PDCD5-207ENST00000590247 RPTORQ8N122 1335 aa23.08■■□□□ 1.28
PDCD5-207ENST00000590247 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.28
PDCD5-207ENST00000590247 MPHOSPH10O00566 681 aaKnown RBP23.07■■□□□ 1.28
PDCD5-207ENST00000590247 GNAT2P19087 354 aa23.07■■□□□ 1.28
PDCD5-207ENST00000590247 SBK1Q52WX2 424 aa23.07■■□□□ 1.28
PDCD5-207ENST00000590247 MAP3K21Q5TCX8 1036 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms