RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 HMGCRP04035 888 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 MAPK4P31152 587 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
MBD1-220ENST00000589758 UBE2Q1Q7Z7E8 422 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.36
MBD1-220ENST00000589758 SDR42E1Q8WUS8 393 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 NUDT12Q9BQG2 462 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 ARMT1Q9H993 441 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 TXNRD2Q9NNW7 524 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 PAK6Q9NQU5 681 aaPredicted RBP17.33■□□□□ 0.36
MBD1-220ENST00000589758 RBPJLQ9UBG7 517 aa17.33■□□□□ 0.36
MBD1-220ENST00000589758 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
MBD1-220ENST00000589758 ERVK-9P63128 1117 aa17.32■□□□□ 0.36
MBD1-220ENST00000589758 ERVK-24P63145 666 aa17.32■□□□□ 0.36
MBD1-220ENST00000589758 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
MBD1-220ENST00000589758 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
MBD1-220ENST00000589758 FARP2O94887 1054 aaPredicted RBP17.31■□□□□ 0.36
MBD1-220ENST00000589758 MBD4O95243 580 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 TFRCP02786 760 aaKnown RBP17.31■□□□□ 0.36
MBD1-220ENST00000589758 XRCC5P13010 732 aaKnown RBP17.31■□□□□ 0.36
MBD1-220ENST00000589758 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 ACER1Q8TDN7 264 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 DPF3Q92784 378 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 DEFB118Q96PH6 123 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 RABGAP1Q9Y3P9 1069 aa17.31■□□□□ 0.36
MBD1-220ENST00000589758 RPTORQ8N122 1335 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 MPHOSPH10O00566 681 aaKnown RBP17.3■□□□□ 0.36
MBD1-220ENST00000589758 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
MBD1-220ENST00000589758 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 CCNA1P78396 465 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 SEPT2Q15019 361 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 Q3C1V9 767 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
MBD1-220ENST00000589758 TMEM179Q6ZVK1 233 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 TRMT44Q8IYL2 757 aaKnown RBP17.3■□□□□ 0.36
MBD1-220ENST00000589758 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.3■□□□□ 0.36
MBD1-220ENST00000589758 HMX1Q9NP08 348 aaPredicted RBP17.3■□□□□ 0.36
MBD1-220ENST00000589758 ECHDC1Q9NTX5 307 aa17.3■□□□□ 0.36
MBD1-220ENST00000589758 PLXNB2O15031 1838 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 GLRX3O76003 335 aaKnown RBP17.29■□□□□ 0.36
MBD1-220ENST00000589758 VCAM1P19320 739 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 CYP2B6P20813 491 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 LBX2Q6XYB7 198 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 PLEKHH3Q7Z736 793 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 CRISPLD2Q9H0B8 497 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
MBD1-220ENST00000589758 MKI67P46013 3256 aaKnown RBP17.29■□□□□ 0.36
MBD1-220ENST00000589758 MYH7P12883 1935 aa17.29■□□□□ 0.36
MBD1-220ENST00000589758 H0YGN5 161 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 PRKAB2O43741 272 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 PEX10O60683 326 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 CYP2D6P10635 497 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 EVX2Q03828 476 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 C12orf60Q5U649 245 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 GPR142Q7Z601 462 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 ANKLE1Q8NAG6 615 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 PORCNQ9H237 461 aa17.28■□□□□ 0.36
MBD1-220ENST00000589758 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
MBD1-220ENST00000589758 RGS2P41220 211 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 POTEEQ6S8J3 1075 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 TRIB2Q92519 343 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 USP6NLQ92738 828 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 HOXC10Q9NYD6 342 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 SLC4A4Q9Y6R1 1079 aa17.27■□□□□ 0.36
MBD1-220ENST00000589758 MYH8P13535 1937 aa17.27■□□□□ 0.35
MBD1-220ENST00000589758 USP17L12C9JPN9 530 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 USP17L21D6R901 530 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 CNMDO75829 334 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 COG2Q14746 738 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 MORN1Q5T089 497 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
MBD1-220ENST00000589758 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
MBD1-220ENST00000589758 CDK8P49336 464 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 TRIM32Q13049 653 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 MAP2K5Q13163 448 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 MAP3K21Q5TCX8 1036 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 C16orf86Q6ZW13 317 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 NECAB2Q7Z6G3 386 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 KBTBD3Q8NAB2 608 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 LPAR1Q92633 364 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 APBA2Q99767 749 aa17.25■□□□□ 0.35
MBD1-220ENST00000589758 PUS7LQ9H0K6 701 aaKnown RBP17.25■□□□□ 0.35
MBD1-220ENST00000589758 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
MBD1-220ENST00000589758 COLQQ9Y215 455 aaPredicted RBP17.25■□□□□ 0.35
MBD1-220ENST00000589758 BAZ2AQ9UIF9 1905 aaKnown RBP17.25■□□□□ 0.35
MBD1-220ENST00000589758 SLC15A5A6NIM6 579 aa17.24■□□□□ 0.35
MBD1-220ENST00000589758 SPDYE16A6NNV3 312 aaPredicted RBP17.24■□□□□ 0.35
MBD1-220ENST00000589758 ZFYP08048 801 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms