RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SENP6Q9GZR1 1112 aaPredicted RBP18.62■□□□□ 0.57
ACTN4-211ENST00000589528 GPR108Q9NPR9 543 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 PRKAG2Q9UGJ0 569 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 RABGAP1Q9Y3P9 1069 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 NDUFB9Q9Y6M9 179 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 CYP2E1P05181 493 aaPredicted RBP18.61■□□□□ 0.57
ACTN4-211ENST00000589528 TRIM27P14373 513 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 CYP7A1P22680 504 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 USP14P54578 494 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 ATP2B2Q01814 1243 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 CLUAP1Q96AJ1 413 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 UNC80Q8N2C7 3258 aa18.61■□□□□ 0.57
ACTN4-211ENST00000589528 MSCO60682 206 aa18.6■□□□□ 0.57
ACTN4-211ENST00000589528 IGSF3O75054 1194 aa18.6■□□□□ 0.57
ACTN4-211ENST00000589528 ZAP70P43403 619 aa18.6■□□□□ 0.57
ACTN4-211ENST00000589528 DYNLL1P63167 89 aaKnown RBP18.6■□□□□ 0.57
ACTN4-211ENST00000589528 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
ACTN4-211ENST00000589528 LAMA2P24043 3122 aaKnown RBP18.59■□□□□ 0.57
ACTN4-211ENST00000589528 SLC15A5A6NIM6 579 aa18.59■□□□□ 0.57
ACTN4-211ENST00000589528 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
ACTN4-211ENST00000589528 C12orf42Q96LP6 360 aa18.59■□□□□ 0.57
ACTN4-211ENST00000589528 CABP5Q9NP86 173 aa18.59■□□□□ 0.57
ACTN4-211ENST00000589528 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
ACTN4-211ENST00000589528 SURF6O75683 361 aaKnown RBP18.58■□□□□ 0.56
ACTN4-211ENST00000589528 ATN1P54259 1190 aaPredicted RBP18.58■□□□□ 0.56
ACTN4-211ENST00000589528 CERKLQ49MI3 558 aaPredicted RBP18.58■□□□□ 0.56
ACTN4-211ENST00000589528 MIGA1Q8NAN2 632 aa18.58■□□□□ 0.56
ACTN4-211ENST00000589528 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
ACTN4-211ENST00000589528 DDX20Q9UHI6 824 aaKnown RBP18.58■□□□□ 0.56
ACTN4-211ENST00000589528 CNMDO75829 334 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 VCAM1P19320 739 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 PTPREP23469 700 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 CATSPERGQ6ZRH7 1159 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 TTC6Q86TZ1 520 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 LPAR1Q92633 364 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 ZNF512BQ96KM6 892 aaPredicted RBP18.57■□□□□ 0.56
ACTN4-211ENST00000589528 FAM161BQ96MY7 647 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
ACTN4-211ENST00000589528 POLA2Q14181 598 aa18.56■□□□□ 0.56
ACTN4-211ENST00000589528 TATDN1Q6P1N9 297 aa18.56■□□□□ 0.56
ACTN4-211ENST00000589528 POTEEQ6S8J3 1075 aa18.56■□□□□ 0.56
ACTN4-211ENST00000589528 MAGEB6Q8N7X4 407 aa18.56■□□□□ 0.56
ACTN4-211ENST00000589528 KIAA1683Q9H0B3 1180 aa18.56■□□□□ 0.56
ACTN4-211ENST00000589528 EHD4Q9H223 541 aa18.56■□□□□ 0.56
ACTN4-211ENST00000589528 DNM1LO00429 736 aa18.55■□□□□ 0.56
ACTN4-211ENST00000589528 GRB14Q14449 540 aa18.55■□□□□ 0.56
ACTN4-211ENST00000589528 ZNF697Q5TEC3 545 aa18.55■□□□□ 0.56
ACTN4-211ENST00000589528 FAM109BQ6ICB4 259 aaPredicted RBP18.55■□□□□ 0.56
ACTN4-211ENST00000589528 DPP9Q86TI2 863 aa18.55■□□□□ 0.56
ACTN4-211ENST00000589528 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.563e-6■■■■□ 23
ACTN4-211ENST00000589528 RPAP3Q9H6T3 665 aaPredicted RBP18.55■□□□□ 0.56
ACTN4-211ENST00000589528 ATP11BQ9Y2G3 1177 aa18.55■□□□□ 0.56
ACTN4-211ENST00000589528 MYH8P13535 1937 aa18.55■□□□□ 0.56
ACTN4-211ENST00000589528 KBTBD13C9JR72 458 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 BCAR3O75815 825 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 MYCNP04198 464 aaPredicted RBP18.54■□□□□ 0.56
ACTN4-211ENST00000589528 CYP2C19P33261 490 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 RTP1P59025 263 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 ATP8B2P98198 1209 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 MAP3K12Q12852 859 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 LBX2Q6XYB7 198 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 SSH3Q8TE77 659 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 CCDC8Q9H0W5 538 aaPredicted RBP18.54■□□□□ 0.56
ACTN4-211ENST00000589528 BTBD7Q9P203 1132 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 DBNLQ9UJU6 430 aaKnown RBP18.54■□□□□ 0.56
ACTN4-211ENST00000589528 NAV1Q8NEY1 1877 aa18.54■□□□□ 0.56
ACTN4-211ENST00000589528 LTBP2Q14767 1821 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 RLFQ13129 1914 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 SPDYE16A6NNV3 312 aaPredicted RBP18.53■□□□□ 0.56
ACTN4-211ENST00000589528 POTEB2H3BUK9 544 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
ACTN4-211ENST00000589528 HOXC6P09630 235 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 GJC2Q5T442 439 aaPredicted RBP18.53■□□□□ 0.56
ACTN4-211ENST00000589528 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 TMEM57Q8N5G2 664 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 ARRDC4Q8NCT1 418 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 NPLOC4Q8TAT6 608 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 ACER1Q8TDN7 264 aa18.53■□□□□ 0.56
ACTN4-211ENST00000589528 TLR7Q9NYK1 1049 aaKnown RBP18.53■□□□□ 0.56
ACTN4-211ENST00000589528 MPHOSPH10O00566 681 aaKnown RBP18.52■□□□□ 0.56
ACTN4-211ENST00000589528 GUCD1Q96NT3 240 aa18.52■□□□□ 0.56
ACTN4-211ENST00000589528 COL25A1Q9BXS0 654 aaPredicted RBP18.52■□□□□ 0.56
ACTN4-211ENST00000589528 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
ACTN4-211ENST00000589528 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
ACTN4-211ENST00000589528 PRDM5Q9NQX1 630 aaPredicted RBP18.52■□□□□ 0.56
ACTN4-211ENST00000589528 SLC5A4Q9NY91 659 aa18.52■□□□□ 0.56
ACTN4-211ENST00000589528 CYBAP13498 195 aa18.51■□□□□ 0.55
ACTN4-211ENST00000589528 ADORA2AP29274 412 aa18.51■□□□□ 0.55
ACTN4-211ENST00000589528 FTSJ3Q8IY81 847 aaKnown RBP18.51■□□□□ 0.55
ACTN4-211ENST00000589528 HOXC10Q9NYD6 342 aa18.51■□□□□ 0.55
ACTN4-211ENST00000589528 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
ACTN4-211ENST00000589528 STRNO43815 780 aa18.5■□□□□ 0.55
ACTN4-211ENST00000589528 PLS1Q14651 629 aa18.5■□□□□ 0.55
ACTN4-211ENST00000589528 COG2Q14746 738 aa18.5■□□□□ 0.55
ACTN4-211ENST00000589528 SEPT2Q15019 361 aa18.5■□□□□ 0.55
ACTN4-211ENST00000589528 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
ACTN4-211ENST00000589528 TRPV1Q8NER1 839 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms