RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 PAXBP1Q9Y5B6 917 aa20.16■□□□□ 0.82
ERCC2-211ENST00000588652 PRPF3O43395 683 aaKnown RBP20.15■□□□□ 0.82
ERCC2-211ENST00000588652 GPSM2P81274 684 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 PDE4BQ07343 736 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 OXER1Q8TDS5 423 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 OSBPL5Q9H0X9 879 aaPredicted RBP20.15■□□□□ 0.82
ERCC2-211ENST00000588652 USP17L8P0C7I0 530 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 GSDMDP57764 484 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 ST5P78524 1137 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 SLC27A3Q5K4L6 730 aa20.15■□□□□ 0.82
ERCC2-211ENST00000588652 KRI1Q8N9T8 703 aaKnown RBP20.15■□□□□ 0.82
ERCC2-211ENST00000588652 XBP1P17861 261 aa20.14■□□□□ 0.82
ERCC2-211ENST00000588652 NCAPHQ15003 741 aa20.14■□□□□ 0.82
ERCC2-211ENST00000588652 GRIK5Q16478 980 aa20.14■□□□□ 0.82
ERCC2-211ENST00000588652 QTRT2Q9H974 415 aaKnown RBP20.14■□□□□ 0.82
ERCC2-211ENST00000588652 VPS54Q9P1Q0 977 aa20.14■□□□□ 0.82
ERCC2-211ENST00000588652 IMPACTQ9P2X3 320 aa20.14■□□□□ 0.82
ERCC2-211ENST00000588652 DIXDC1Q155Q3 683 aa20.14■□□□□ 0.81
ERCC2-211ENST00000588652 CEP135Q66GS9 1140 aa20.14■□□□□ 0.81
ERCC2-211ENST00000588652 NYAP1Q6ZVC0 841 aa20.14■□□□□ 0.81
ERCC2-211ENST00000588652 XPO4Q9C0E2 1151 aaKnown RBP20.14■□□□□ 0.81
ERCC2-211ENST00000588652 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
ERCC2-211ENST00000588652 TMTC3Q6ZXV5 915 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 PHF20Q9BVI0 1012 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 hCG_1642624A0A1W2PR95 340 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 TSPY2A6NKD2 308 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 PDCL2Q8N4E4 241 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-211ENST00000588652 KCND1Q9NSA2 647 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 IFNKQ9P0W0 207 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 TUBE1Q9UJT0 475 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 PCDHB6Q9Y5E3 794 aa20.13■□□□□ 0.81
ERCC2-211ENST00000588652 UFL1O94874 794 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 SMC2O95347 1197 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 USP5P45974 858 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 GSTO1P78417 241 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 NCBP1Q09161 790 aaKnown RBP20.12■□□□□ 0.81
ERCC2-211ENST00000588652 SYCP1Q15431 976 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 SLC4A8Q2Y0W8 1093 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 CCDC112Q8NEF3 446 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 RBM17Q96I25 401 aaKnown RBP20.12■□□□□ 0.81
ERCC2-211ENST00000588652 CABP5Q9NP86 173 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 KCNH3Q9ULD8 1083 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 PTPREP23469 700 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 CCAR2Q8N163 923 aaKnown RBP20.12■□□□□ 0.81
ERCC2-211ENST00000588652 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
ERCC2-211ENST00000588652 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
ERCC2-211ENST00000588652 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
ERCC2-211ENST00000588652 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 BAG3O95817 575 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 ATP2B4P23634 1241 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 PPP4CP60510 307 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 PPP4R3BQ5MIZ7 849 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 RCSD1Q6JBY9 416 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 CNTNAP5Q8WYK1 1306 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 BAZ2BQ9UIF8 2168 aaKnown RBP20.11■□□□□ 0.81
ERCC2-211ENST00000588652 IKBKBO14920 756 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 TRIM37O94972 964 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 GRIN1Q05586 938 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 SRBD1Q8N5C6 995 aaKnown RBP20.11■□□□□ 0.81
ERCC2-211ENST00000588652 ZMYND15Q9H091 742 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 GGA1Q9UJY5 639 aa20.11■□□□□ 0.81
ERCC2-211ENST00000588652 DDR1Q08345 913 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 LONRF3Q496Y0 759 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 SPECC1Q5M775 1068 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 TMC6Q7Z403 805 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 ROBO3Q96MS0 1386 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 BBOX1O75936 387 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 LDHCP07864 332 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 KRT2P35908 639 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 ISM2Q6H9L7 571 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 KRBA2Q6ZNG9 492 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 ZNF592Q92610 1267 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 HSD3B7Q9H2F3 369 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
ERCC2-211ENST00000588652 NAV1Q8NEY1 1877 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 IL1R1P14778 569 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 ATP2B1P20020 1258 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
ERCC2-211ENST00000588652 TFAP4Q01664 338 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 PNOCQ13519 176 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 ARMCX5Q6P1M9 558 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 METTL16Q86W50 562 aaKnown RBP20.09■□□□□ 0.81
ERCC2-211ENST00000588652 CCDC150Q8NCX0 1101 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 DYNLL2Q96FJ2 89 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 TRMT1Q9NXH9 659 aaKnown RBP20.09■□□□□ 0.81
ERCC2-211ENST00000588652 CDK5RAP2Q96SN8 1893 aa20.09■□□□□ 0.81
ERCC2-211ENST00000588652 FAM205CA6NFA0 338 aa20.08■□□□□ 0.81
ERCC2-211ENST00000588652 POLRMTO00411 1230 aaKnown RBP20.08■□□□□ 0.81
ERCC2-211ENST00000588652 NT5C2P49902 561 aa20.08■□□□□ 0.81
ERCC2-211ENST00000588652 DHX8Q14562 1220 aaKnown RBP20.08■□□□□ 0.81
ERCC2-211ENST00000588652 EARS2Q5JPH6 523 aaKnown RBP20.08■□□□□ 0.81
ERCC2-211ENST00000588652 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
ERCC2-211ENST00000588652 NOL10Q9BSC4 688 aaKnown RBP20.08■□□□□ 0.81
ERCC2-211ENST00000588652 RTFDC1Q9BY42 306 aaPredicted RBP20.08■□□□□ 0.81
ERCC2-211ENST00000588652 IL17RBQ9NRM6 502 aa20.08■□□□□ 0.81
ERCC2-211ENST00000588652 SRPRBQ9Y5M8 271 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms