RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ACER1Q8TDN7 264 aa24.05■■□□□ 1.44
DDX39A-207ENST00000588542 DSCC1Q9BVC3 393 aa24.05■■□□□ 1.44
DDX39A-207ENST00000588542 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.05■■□□□ 1.44
DDX39A-207ENST00000588542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.05■■□□□ 1.44
DDX39A-207ENST00000588542 MYH4Q9Y623 1939 aa24.05■■□□□ 1.44
DDX39A-207ENST00000588542 USP17L10C9JJH3 530 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 PDHXO00330 501 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 SGSM2O43147 1006 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 TAF1CQ15572 869 aaPredicted RBP24.04■■□□□ 1.44
DDX39A-207ENST00000588542 CLEC10AQ8IUN9 316 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 SIAH1Q8IUQ4 282 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 INCENPQ9NQS7 918 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 PRDM10Q9NQV6 1147 aa24.04■■□□□ 1.44
DDX39A-207ENST00000588542 C19orf81C9J6K1 198 aa24.03■■□□□ 1.44
DDX39A-207ENST00000588542 SLC3A2P08195 630 aaKnown RBP24.03■■□□□ 1.44
DDX39A-207ENST00000588542 PDE4BQ07343 736 aa24.03■■□□□ 1.44
DDX39A-207ENST00000588542 TREML2Q5T2D2 321 aa24.03■■□□□ 1.44
DDX39A-207ENST00000588542 NBPF3Q9H094 633 aa24.03■■□□□ 1.44
DDX39A-207ENST00000588542 ZNF287Q9HBT7 754 aa24.03■■□□□ 1.44
DDX39A-207ENST00000588542 A0A1W2PRG0 241 aa24.02■■□□□ 1.44
DDX39A-207ENST00000588542 FGRP09769 529 aa24.02■■□□□ 1.44
DDX39A-207ENST00000588542 KIAA1683Q9H0B3 1180 aa24.02■■□□□ 1.44
DDX39A-207ENST00000588542 EMILIN3Q9NT22 766 aa24.02■■□□□ 1.44
DDX39A-207ENST00000588542 AGTPBP1Q9UPW5 1226 aa24.02■■□□□ 1.44
DDX39A-207ENST00000588542 GPR25O00155 361 aa24.01■■□□□ 1.43
DDX39A-207ENST00000588542 HAND2P61296 217 aa24.01■■□□□ 1.43
DDX39A-207ENST00000588542 PTH1RQ03431 593 aa24.01■■□□□ 1.43
DDX39A-207ENST00000588542 NOM1Q5C9Z4 860 aaKnown RBP24.01■■□□□ 1.43
DDX39A-207ENST00000588542 ZNF444Q8N0Y2 327 aaPredicted RBP24.01■■□□□ 1.43
DDX39A-207ENST00000588542 ZFYVE28Q9HCC9 887 aa24.01■■□□□ 1.43
DDX39A-207ENST00000588542 SLC45A1Q9Y2W3 748 aa24.01■■□□□ 1.43
DDX39A-207ENST00000588542 IGKV6D-41A0A0C4DH26 115 aa24■■□□□ 1.43
DDX39A-207ENST00000588542 ICA1Q05084 483 aa24■■□□□ 1.43
DDX39A-207ENST00000588542 USP17L2Q6R6M4 530 aa24■■□□□ 1.43
DDX39A-207ENST00000588542 PLIN4Q96Q06 1357 aa24■■□□□ 1.43
DDX39A-207ENST00000588542 ORC4O43929 436 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 ZYXQ15942 572 aaKnown RBP23.99■■□□□ 1.43
DDX39A-207ENST00000588542 TBC1D10CQ8IV04 446 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 C12orf42Q96LP6 360 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 FEZ1Q99689 392 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 ESYT1Q9BSJ8 1104 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 KANSL2Q9H9L4 492 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 TMOD4Q9NZQ9 345 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 ADGRA2Q96PE1 1338 aa23.99■■□□□ 1.43
DDX39A-207ENST00000588542 TLR2O60603 784 aa23.98■■□□□ 1.43
DDX39A-207ENST00000588542 CYP2C8P10632 490 aa23.98■■□□□ 1.43
DDX39A-207ENST00000588542 FAM47AQ5JRC9 791 aa23.98■■□□□ 1.43
DDX39A-207ENST00000588542 NEDD1Q8NHV4 660 aa23.98■■□□□ 1.43
DDX39A-207ENST00000588542 ZNF296Q8WUU4 475 aaPredicted RBP23.98■■□□□ 1.43
DDX39A-207ENST00000588542 TMX2Q9Y320 296 aa23.98■■□□□ 1.43
DDX39A-207ENST00000588542 ZNF213O14771 459 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 EEF2P13639 858 aaKnown RBP23.97■■□□□ 1.43
DDX39A-207ENST00000588542 USP14P54578 494 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 TFAP4Q01664 338 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 PARP14Q460N5 1801 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 STAG1Q8WVM7 1258 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 ARHGEF10LQ9HCE6 1279 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 CTNNA3Q9UI47 895 aa23.97■■□□□ 1.43
DDX39A-207ENST00000588542 RLFQ13129 1914 aa23.96■■□□□ 1.43
DDX39A-207ENST00000588542 ZSWIM8A7E2V4 1837 aa23.96■■□□□ 1.43
DDX39A-207ENST00000588542 CDC45O75419 566 aa23.96■■□□□ 1.43
DDX39A-207ENST00000588542 HOXA7P31268 230 aaPredicted RBP23.96■■□□□ 1.43
DDX39A-207ENST00000588542 KIAA1755Q5JYT7 1200 aa23.96■■□□□ 1.43
DDX39A-207ENST00000588542 AKNAD1Q5T1N1 836 aa23.96■■□□□ 1.43
DDX39A-207ENST00000588542 COL13A1Q5TAT6 717 aaPredicted RBP23.96■■□□□ 1.43
DDX39A-207ENST00000588542 NKX2-3Q8TAU0 364 aa23.96■■□□□ 1.43
DDX39A-207ENST00000588542 PARK7Q99497 189 aaKnown RBP23.96■■□□□ 1.43
DDX39A-207ENST00000588542 TSPY3P0CV98 308 aa23.95■■□□□ 1.42
DDX39A-207ENST00000588542 TSPY8P0CW00 308 aa23.95■■□□□ 1.42
DDX39A-207ENST00000588542 C17orf99Q6UX52 265 aa23.95■■□□□ 1.42
DDX39A-207ENST00000588542 CEP95Q96GE4 821 aa23.95■■□□□ 1.42
DDX39A-207ENST00000588542 ASCC2Q9H1I8 757 aaPredicted RBP23.95■■□□□ 1.42
DDX39A-207ENST00000588542 MTMR4Q9NYA4 1195 aa23.95■■□□□ 1.42
DDX39A-207ENST00000588542 NYAP2Q9P242 653 aa23.95■■□□□ 1.42
DDX39A-207ENST00000588542 MGAMO43451 1857 aa23.94■■□□□ 1.42
DDX39A-207ENST00000588542 FKTNO75072 461 aa23.94■■□□□ 1.42
DDX39A-207ENST00000588542 VCAM1P19320 739 aa23.94■■□□□ 1.42
DDX39A-207ENST00000588542 ATP2B2Q01814 1243 aa23.94■■□□□ 1.42
DDX39A-207ENST00000588542 PABPC4Q13310 644 aaKnown RBP eCLIP23.94■■□□□ 1.42
DDX39A-207ENST00000588542 IMMTQ16891 758 aaKnown RBP23.94■■□□□ 1.42
DDX39A-207ENST00000588542 MFSD6Q6ZSS7 791 aa23.94■■□□□ 1.42
DDX39A-207ENST00000588542 MAP4K1Q92918 833 aa23.94■■□□□ 1.42
DDX39A-207ENST00000588542 LSG1Q9H089 658 aaKnown RBP23.94■■□□□ 1.42
DDX39A-207ENST00000588542 NEDD4P46934 1319 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 TSPY2A6NKD2 308 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 RANBP6O60518 1105 aaKnown RBP23.93■■□□□ 1.42
DDX39A-207ENST00000588542 PCP11498 1178 aaKnown RBP23.93■■□□□ 1.42
DDX39A-207ENST00000588542 RRP12Q5JTH9 1297 aaKnown RBP23.93■■□□□ 1.42
DDX39A-207ENST00000588542 SH2D4AQ9H788 454 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 VCPKMTQ9H867 229 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 IL17RBQ9NRM6 502 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 CPA4Q9UI42 421 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 PNMA3Q9UL41 463 aa23.93■■□□□ 1.42
DDX39A-207ENST00000588542 U3KPZ7 1027 aaPredicted RBP23.93■■□□□ 1.42
DDX39A-207ENST00000588542 BCRP11274 1271 aa23.92■■□□□ 1.42
DDX39A-207ENST00000588542 SP3Q02447 781 aa23.92■■□□□ 1.42
DDX39A-207ENST00000588542 MKL1Q969V6 931 aa23.92■■□□□ 1.42
DDX39A-207ENST00000588542 RNF41Q9H4P4 317 aaPredicted RBP23.92■■□□□ 1.42
DDX39A-207ENST00000588542 TOMM22Q9NS69 142 aa23.92■■□□□ 1.42
DDX39A-207ENST00000588542 CLIP2Q9UDT6 1046 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms