RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PLEKHH3Q7Z736 793 aa16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 TRMT44Q8IYL2 757 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 C1orf115Q9H7X2 142 aa16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 MTMR10Q9NXD2 777 aa16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 NDUFB9Q9Y6M9 179 aa16.9■□□□□ 0.3
CLPTM1-208ENST00000588274 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 VCAM1P19320 739 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 GUCY1A2P33402 732 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 EVX2Q03828 476 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 MAP2K5Q13163 448 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 DEFB123Q8N688 67 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 MIGA1Q8NAN2 632 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 ACER1Q8TDN7 264 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 KIAA1683Q9H0B3 1180 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 BTBD7Q9P203 1132 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
CLPTM1-208ENST00000588274 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 HOXC6P09630 235 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 RLBP1P12271 317 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 CYP7A1P22680 504 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 SHMT1P34896 483 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 CATSPERGQ6ZRH7 1159 aa16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 RIOK1Q9BRS2 568 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-208ENST00000588274 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 SURF6O75683 361 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 GABPAQ06546 454 aa16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 GRB14Q14449 540 aa16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 ZYXQ15942 572 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 TRPV1Q8NER1 839 aa16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 UBE2OQ9C0C9 1292 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 SERPINB13Q9UIV8 391 aa16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 PTPREP23469 700 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 PLCD1P51178 756 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 ZKSCAN2Q63HK3 967 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 NPLOC4Q8TAT6 608 aa16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
CLPTM1-208ENST00000588274 PRUNE2Q8WUY3 3088 aa16.85■□□□□ 0.29
CLPTM1-208ENST00000588274 IDH1O75874 414 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-208ENST00000588274 MAGEB6Q8N7X4 407 aa16.85■□□□□ 0.29
CLPTM1-208ENST00000588274 TRIM34Q9BYJ4 488 aa16.85■□□□□ 0.29
CLPTM1-208ENST00000588274 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 CYBAP13498 195 aa16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 MDM2Q00987 491 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 EDC3Q96F86 508 aaKnown RBP16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 DDX20Q9UHI6 824 aaKnown RBP16.84■□□□□ 0.29
CLPTM1-208ENST00000588274 POTEB2H3BUK9 544 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 USP14P54578 494 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 RAB3GAP1Q15042 981 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 ABCB5Q2M3G0 1257 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 CEP85Q6P2H3 762 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 GUCD1Q96NT3 240 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 FEZ1Q99689 392 aa16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
CLPTM1-208ENST00000588274 CYP2C19P33261 490 aa16.82■□□□□ 0.28
CLPTM1-208ENST00000588274 USP5P45974 858 aa16.82■□□□□ 0.28
CLPTM1-208ENST00000588274 CCNA1P78396 465 aa16.82■□□□□ 0.28
CLPTM1-208ENST00000588274 CERKLQ49MI3 558 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-208ENST00000588274 TMED8Q6PL24 325 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-208ENST00000588274 LPAR1Q92633 364 aa16.82■□□□□ 0.28
CLPTM1-208ENST00000588274 DNM1LO00429 736 aa16.81■□□□□ 0.28
CLPTM1-208ENST00000588274 SEPT2Q15019 361 aa16.81■□□□□ 0.28
CLPTM1-208ENST00000588274 TTC6Q86TZ1 520 aa16.81■□□□□ 0.28
CLPTM1-208ENST00000588274 MOV10L1Q9BXT6 1211 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-208ENST00000588274 TCRBV5S4A2TA0A5A2 114 aa16.8■□□□□ 0.28
CLPTM1-208ENST00000588274 SNX17Q15036 470 aa16.8■□□□□ 0.28
CLPTM1-208ENST00000588274 MFSD14CQ5VZR4 134 aa16.8■□□□□ 0.28
CLPTM1-208ENST00000588274 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
CLPTM1-208ENST00000588274 SENP6Q9GZR1 1112 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-208ENST00000588274 EXOC6BQ9Y2D4 811 aa16.8■□□□□ 0.28
CLPTM1-208ENST00000588274 MSCO60682 206 aa16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 GLRX3O76003 335 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 PDE6AP16499 860 aa16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 ADORA2AP29274 412 aa16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 OLFML2BQ68BL8 750 aa16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 FAM109BQ6ICB4 259 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 SLC44A5Q8NCS7 719 aa16.79■□□□□ 0.28
CLPTM1-208ENST00000588274 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
CLPTM1-208ENST00000588274 COBLO75128 1261 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms