RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 NUCB1Q02818 461 aa14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 GABPAQ06546 454 aa14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 B4GALNT3Q6L9W6 998 aa14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 USP17L2Q6R6M4 530 aa14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 CCDC84Q86UT8 332 aaPredicted RBP14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 STRBPQ96SI9 672 aaKnown RBP14.03□□□□□ -0.16
PRKCSH-207ENST00000588269 USP17L12C9JPN9 530 aa14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L21D6R901 530 aa14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 SHMT1P34896 483 aa14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 MFAP1P55081 439 aaKnown RBP14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 GPAT2Q6NUI2 795 aa14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 OSBP2Q969R2 916 aa14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 ARHGEF10LQ9HCE6 1279 aa14.02□□□□□ -0.17
PRKCSH-207ENST00000588269 ROBO3Q96MS0 1386 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 TRIM6-TRIM34B2RNG4 842 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 PRKAB2O43741 272 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 FMNL1O95466 1100 aaPredicted RBP14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 RRP1BQ14684 758 aaKnown RBP14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 FAM110CQ1W6H9 321 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 SBK1Q52WX2 424 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 ZMYM1Q5SVZ6 1142 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 C12orf60Q5U649 245 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 C16orf86Q6ZW13 317 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 NAPBQ9H115 298 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 SRRDQ9UH36 339 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 GABRQQ9UN88 632 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 MYH8P13535 1937 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 MGAMO43451 1857 aa14.01□□□□□ -0.17
PRKCSH-207ENST00000588269 MYPNQ86TC9 1320 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 HIP1O00291 1037 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 ICA1Q05084 483 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 PRKCZQ05513 592 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 SLFNL1Q499Z3 407 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 TREML2Q5T2D2 321 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 CHRDL2Q6WN34 429 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 RAET1EQ8TD07 263 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 C12orf42Q96LP6 360 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 KIAA1683Q9H0B3 1180 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 HELLSQ9NRZ9 838 aa14□□□□□ -0.17
PRKCSH-207ENST00000588269 PATL2C9JE40 543 aaKnown RBP13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 M0R2C6 588 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 CYP2D6P10635 497 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 BCRP11274 1271 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 HOXA7P31268 230 aaPredicted RBP13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 CDK8P49336 464 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 CTR9Q6PD62 1173 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 LPAR1Q92633 364 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 ASCC2Q9H1I8 757 aaPredicted RBP13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 OSBPL3Q9H4L5 887 aa13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 BAZ2AQ9UIF9 1905 aaKnown RBP13.99□□□□□ -0.17
PRKCSH-207ENST00000588269 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 TNPO2O14787 897 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 IGHDP01880 384 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 CHGBP05060 677 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 CCL5P13501 91 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 GRK4P32298 578 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 PDE4BQ07343 736 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 SEPT2Q15019 361 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 ZYXQ15942 572 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 CCAR1Q8IX12 1150 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 ANKRD13CQ8N6S4 541 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 SLC44A5Q8NCS7 719 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 DPF3Q92784 378 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 RILPL2Q969X0 211 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 COA7Q96BR5 231 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 DIAPH3Q9NSV4 1193 aa13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 BIN2Q9UBW5 565 aaPredicted RBP13.98□□□□□ -0.17
PRKCSH-207ENST00000588269 ELNP15502 786 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 VCAM1P19320 739 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 IFNL3Q8IZI9 196 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 DYNLL2Q96FJ2 89 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 UNC93B1Q9H1C4 597 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 KANSL2Q9H9L4 492 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
PRKCSH-207ENST00000588269 HERVK_113P62684 666 aa13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 CCNA1P78396 465 aa13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 JAG1P78504 1218 aa13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 SHROOM1Q2M3G4 852 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 EPB41L4AQ9HCS5 686 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 DOCK3Q8IZD9 2030 aa13.96□□□□□ -0.17
PRKCSH-207ENST00000588269 ZMYM6O95789 1325 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms