RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 RAD50Q92878 1312 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 TNPO2O14787 897 aaKnown RBP17.81■□□□□ 0.44
HDAC5-207ENST00000588261 GDF11O95390 407 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 INHAP05111 366 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 IRF5Q13568 498 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 MTMR2Q13614 643 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 U2AF1L4Q8WU68 220 aaKnown RBP17.81■□□□□ 0.44
HDAC5-207ENST00000588261 WDR18Q9BV38 432 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 TXNRD2Q9NNW7 524 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 SAP30BPQ9UHR5 308 aaKnown RBP17.81■□□□□ 0.44
HDAC5-207ENST00000588261 GJD2Q9UKL4 321 aa17.81■□□□□ 0.44
HDAC5-207ENST00000588261 RANBP2P49792 3224 aaKnown RBP17.81■□□□□ 0.44
HDAC5-207ENST00000588261 MAGEB6P1A0A0J9YX57 407 aa17.8■□□□□ 0.44
HDAC5-207ENST00000588261 FARP2O94887 1054 aaPredicted RBP17.8■□□□□ 0.44
HDAC5-207ENST00000588261 SGPL1O95470 568 aa17.8■□□□□ 0.44
HDAC5-207ENST00000588261 EVX2Q03828 476 aa17.8■□□□□ 0.44
HDAC5-207ENST00000588261 MIGA1Q8NAN2 632 aa17.8■□□□□ 0.44
HDAC5-207ENST00000588261 PXYLP1Q8TE99 480 aa17.8■□□□□ 0.44
HDAC5-207ENST00000588261 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
HDAC5-207ENST00000588261 DIAPH3Q9NSV4 1193 aa17.8■□□□□ 0.44
HDAC5-207ENST00000588261 A0A1W2PPC1 479 aa17.79■□□□□ 0.44
HDAC5-207ENST00000588261 BACE1P56817 501 aa17.79■□□□□ 0.44
HDAC5-207ENST00000588261 TRIM32Q13049 653 aa17.79■□□□□ 0.44
HDAC5-207ENST00000588261 PAK6Q9NQU5 681 aaPredicted RBP17.79■□□□□ 0.44
HDAC5-207ENST00000588261 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
HDAC5-207ENST00000588261 GNAT2P19087 354 aa17.78■□□□□ 0.44
HDAC5-207ENST00000588261 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
HDAC5-207ENST00000588261 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
HDAC5-207ENST00000588261 OSBP2Q969R2 916 aa17.78■□□□□ 0.44
HDAC5-207ENST00000588261 P2RX7Q99572 595 aaKnown RBP17.78■□□□□ 0.44
HDAC5-207ENST00000588261 PUS7LQ9H0K6 701 aaKnown RBP17.78■□□□□ 0.44
HDAC5-207ENST00000588261 ZBTB21Q9ULJ3 1066 aa17.78■□□□□ 0.44
HDAC5-207ENST00000588261 EVI5O60447 810 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 MBD4O95243 580 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 TFRCP02786 760 aaKnown RBP17.77■□□□□ 0.44
HDAC5-207ENST00000588261 CHMLP26374 656 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 MCMDC2Q4G0Z9 681 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 FOXP4Q8IVH2 680 aaPredicted RBP17.77■□□□□ 0.44
HDAC5-207ENST00000588261 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 CRNKL1Q9BZJ0 848 aaKnown RBP17.77■□□□□ 0.44
HDAC5-207ENST00000588261 PRO3102Q9H379 93 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 EMILIN3Q9NT22 766 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 MORF4L1Q9UBU8 362 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 PNMA3Q9UL41 463 aa17.77■□□□□ 0.44
HDAC5-207ENST00000588261 GPAA1O43292 621 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 CDC45O75419 566 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 ASNSP08243 561 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
HDAC5-207ENST00000588261 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
HDAC5-207ENST00000588261 NMIQ13287 307 aaPredicted RBP17.76■□□□□ 0.43
HDAC5-207ENST00000588261 CASC1Q6TDU7 716 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 LCORLQ8N3X6 602 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 DIS3LQ8TF46 1054 aaKnown RBP17.76■□□□□ 0.43
HDAC5-207ENST00000588261 COA7Q96BR5 231 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 DEFB118Q96PH6 123 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
HDAC5-207ENST00000588261 CRISPLD2Q9H0B8 497 aa17.76■□□□□ 0.43
HDAC5-207ENST00000588261 A0A0D9SFI3 127 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 M0R2C6 588 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 CHGBP05060 677 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 GCLCP48506 637 aaPredicted RBP17.75■□□□□ 0.43
HDAC5-207ENST00000588261 Q3C1V9 767 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 TATDN1Q6P1N9 297 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 FAM227BQ96M60 508 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 AS3MTQ9HBK9 375 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 RBPJLQ9UBG7 517 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 NAV1Q8NEY1 1877 aa17.75■□□□□ 0.43
HDAC5-207ENST00000588261 CCDC171Q6TFL3 1326 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 ALPK3Q96L96 1907 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 GH2P01242 217 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 GUCY1A2P33402 732 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 PLCD1P51178 756 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 SLFNL1Q499Z3 407 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 CWC27Q6UX04 472 aaKnown RBP17.74■□□□□ 0.43
HDAC5-207ENST00000588261 TRIB2Q92519 343 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 ARMT1Q9H993 441 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 MYH1P12882 1939 aa17.74■□□□□ 0.43
HDAC5-207ENST00000588261 USP17L10C9JJH3 530 aa17.73■□□□□ 0.43
HDAC5-207ENST00000588261 CNMDO75829 334 aa17.73■□□□□ 0.43
HDAC5-207ENST00000588261 SHMT1P34896 483 aa17.73■□□□□ 0.43
HDAC5-207ENST00000588261 HERVK_113P62684 666 aa17.73■□□□□ 0.43
HDAC5-207ENST00000588261 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
HDAC5-207ENST00000588261 DDRGK1Q96HY6 314 aa17.73■□□□□ 0.43
HDAC5-207ENST00000588261 SEC62Q99442 399 aaKnown RBP17.73■□□□□ 0.43
HDAC5-207ENST00000588261 PORCNQ9H237 461 aa17.73■□□□□ 0.43
HDAC5-207ENST00000588261 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 SGSM2O43147 1006 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 USP5P45974 858 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 SLC17A8Q8NDX2 589 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 USP6NLQ92738 828 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.72■□□□□ 0.43
HDAC5-207ENST00000588261 EHD4Q9H223 541 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
HDAC5-207ENST00000588261 C19orf81C9J6K1 198 aa17.71■□□□□ 0.43
HDAC5-207ENST00000588261 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms