RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 USP17L20D6RJB6 530 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 FXR1P51114 621 aaKnown RBP eCLIP16.17■□□□□ 0.18
PKN1-211ENST00000588200 ERVK-9P63128 1117 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 ERVK-24P63145 666 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 USP17L24Q0WX57 530 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 Q3C1V9 767 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 DPF3Q92784 378 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 NUDT12Q9BQG2 462 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
PKN1-211ENST00000588200 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.17■□□□□ 0.18
PKN1-211ENST00000588200 HMX1Q9NP08 348 aaPredicted RBP16.17■□□□□ 0.18
PKN1-211ENST00000588200 CABP5Q9NP86 173 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 RCAN3Q9UKA8 241 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 RABGAP1Q9Y3P9 1069 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 NR2E3Q9Y5X4 410 aa16.17■□□□□ 0.18
PKN1-211ENST00000588200 TFRCP02786 760 aaKnown RBP16.16■□□□□ 0.18
PKN1-211ENST00000588200 GUCY1A2P33402 732 aa16.16■□□□□ 0.18
PKN1-211ENST00000588200 MORN1Q5T089 497 aa16.16■□□□□ 0.18
PKN1-211ENST00000588200 HAUS7Q99871 368 aa16.16■□□□□ 0.18
PKN1-211ENST00000588200 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
PKN1-211ENST00000588200 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
PKN1-211ENST00000588200 ZNF532Q9HCE3 1301 aa16.16■□□□□ 0.18
PKN1-211ENST00000588200 GOLIM4O00461 696 aa16.15■□□□□ 0.18
PKN1-211ENST00000588200 ADD2P35612 726 aa16.15■□□□□ 0.18
PKN1-211ENST00000588200 TRIB2Q92519 343 aa16.15■□□□□ 0.18
PKN1-211ENST00000588200 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
PKN1-211ENST00000588200 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
PKN1-211ENST00000588200 TRIOBPQ9H2D6 2365 aa16.15■□□□□ 0.18
PKN1-211ENST00000588200 MYH7P12883 1935 aa16.14■□□□□ 0.17
PKN1-211ENST00000588200 A0A1W2PPC1 479 aa16.14■□□□□ 0.17
PKN1-211ENST00000588200 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
PKN1-211ENST00000588200 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
PKN1-211ENST00000588200 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
PKN1-211ENST00000588200 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
PKN1-211ENST00000588200 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
PKN1-211ENST00000588200 CNMDO75829 334 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 HOXC6P09630 235 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 VCAM1P19320 739 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 RGS2P41220 211 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 CCNA1P78396 465 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 GPR142Q7Z601 462 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 PLEKHH3Q7Z736 793 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 ACER1Q8TDN7 264 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 FEZ1Q99689 392 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 PORCNQ9H237 461 aa16.13■□□□□ 0.17
PKN1-211ENST00000588200 RLFQ13129 1914 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 ALPK3Q96L96 1907 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 GLRX3O76003 335 aaKnown RBP16.12■□□□□ 0.17
PKN1-211ENST00000588200 IGHA2P01877 340 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 CYP2B6P20813 491 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 MNX1P50219 401 aaPredicted RBP16.12■□□□□ 0.17
PKN1-211ENST00000588200 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 PAWRQ96IZ0 340 aaKnown RBP16.12■□□□□ 0.17
PKN1-211ENST00000588200 DNAJC2Q99543 621 aaKnown RBP16.12■□□□□ 0.17
PKN1-211ENST00000588200 LRRCC1Q9C099 1032 aa16.12■□□□□ 0.17
PKN1-211ENST00000588200 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.174e-7■■■■□ 23.1
PKN1-211ENST00000588200 MYH8P13535 1937 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 MAP2K5Q13163 448 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 SEPT2Q15019 361 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 LPAR1Q92633 364 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 APBA2Q99767 749 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 NBPF3Q9H094 633 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 BOLA2Q9H3K6 86 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 HOXC10Q9NYD6 342 aa16.11■□□□□ 0.17
PKN1-211ENST00000588200 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 SLC15A5A6NIM6 579 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
PKN1-211ENST00000588200 EVI5O60447 810 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 PEX10O60683 326 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
PKN1-211ENST00000588200 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
PKN1-211ENST00000588200 TRIM32Q13049 653 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 COG2Q14746 738 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
PKN1-211ENST00000588200 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
PKN1-211ENST00000588200 PAGR1Q9BTK6 254 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 RBM27Q9P2N5 1060 aaKnown RBP16.1■□□□□ 0.17
PKN1-211ENST00000588200 A0A0G2JMZ2 1700 aa16.1■□□□□ 0.17
PKN1-211ENST00000588200 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
PKN1-211ENST00000588200 APBB1O00213 710 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 STRNO43815 780 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 PTPREP23469 700 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
PKN1-211ENST00000588200 GRB14Q14449 540 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 LHX8Q68G74 356 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 SIAH1Q8IUQ4 282 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 SHCBP1Q8NEM2 672 aa16.09■□□□□ 0.17
PKN1-211ENST00000588200 RPAP3Q9H6T3 665 aaPredicted RBP16.09■□□□□ 0.17
PKN1-211ENST00000588200 DCTPP1Q9H773 170 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms