RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 GNRH1P01148 92 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 HOXA7P31268 230 aaPredicted RBP12.05□□□□□ -0.48
TPM4-207ENST00000588032 EVX2Q03828 476 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 PDE4BQ07343 736 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
TPM4-207ENST00000588032 SEPT2Q15019 361 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 ZNF444Q8N0Y2 327 aaPredicted RBP12.05□□□□□ -0.48
TPM4-207ENST00000588032 C12orf42Q96LP6 360 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 FEZ1Q99689 392 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 KANSL2Q9H9L4 492 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 DIAPH3Q9NSV4 1193 aa12.05□□□□□ -0.48
TPM4-207ENST00000588032 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 CYP2C8P10632 490 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 GCLCP48506 637 aaPredicted RBP12.04□□□□□ -0.48
TPM4-207ENST00000588032 PPARAQ07869 468 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
TPM4-207ENST00000588032 TREML2Q5T2D2 321 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 CCDC129Q6ZRS4 1044 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 SMCR8Q8TEV9 937 aaPredicted RBP12.04□□□□□ -0.48
TPM4-207ENST00000588032 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 MCOLN1Q9GZU1 580 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 ARHGEF10LQ9HCE6 1279 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 ADGRA2Q96PE1 1338 aa12.04□□□□□ -0.48
TPM4-207ENST00000588032 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 ATAD5Q96QE3 1844 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 HSPD1P10809 573 aaKnown RBP12.03□□□□□ -0.48
TPM4-207ENST00000588032 AKR1B1P15121 316 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
TPM4-207ENST00000588032 LACTBP83111 547 aaPredicted RBP12.03□□□□□ -0.48
TPM4-207ENST00000588032 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
TPM4-207ENST00000588032 CD99L2Q8TCZ2 262 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 GTF3C2Q8WUA4 911 aaPredicted RBP12.03□□□□□ -0.48
TPM4-207ENST00000588032 RUFY2Q8WXA3 655 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
TPM4-207ENST00000588032 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 ANAPC4Q9UJX5 808 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 ZMYM6O95789 1325 aa12.03□□□□□ -0.48
TPM4-207ENST00000588032 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 FOXP2O15409 715 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 FGAP02671 866 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 BCRP11274 1271 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.49
TPM4-207ENST00000588032 RASA1P20936 1047 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 HOXD10P28358 340 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 PRMT2P55345 433 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 ICA1Q05084 483 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 FBXO46Q6PJ61 603 aaPredicted RBP12.02□□□□□ -0.49
TPM4-207ENST00000588032 OTOP1Q7RTM1 612 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 LPAR1Q92633 364 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 ABHD8Q96I13 439 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
TPM4-207ENST00000588032 BAZ2AQ9UIF9 1905 aaKnown RBP12.01□□□□□ -0.49
TPM4-207ENST00000588032 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
TPM4-207ENST00000588032 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
TPM4-207ENST00000588032 FAM110CQ1W6H9 321 aa12.01□□□□□ -0.49
TPM4-207ENST00000588032 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
TPM4-207ENST00000588032 VPS53Q5VIR6 699 aa12.01□□□□□ -0.49
TPM4-207ENST00000588032 ZNF589Q86UQ0 364 aaPredicted RBP12.01□□□□□ -0.49
TPM4-207ENST00000588032 SIAH1Q8IUQ4 282 aa12.01□□□□□ -0.49
TPM4-207ENST00000588032 NYAP2Q9P242 653 aa12.01□□□□□ -0.49
TPM4-207ENST00000588032 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
TPM4-207ENST00000588032 PTPRFP10586 1907 aa12□□□□□ -0.49
TPM4-207ENST00000588032 A0A1W2PRG0 241 aa12□□□□□ -0.49
TPM4-207ENST00000588032 FGRP09769 529 aa12□□□□□ -0.49
TPM4-207ENST00000588032 EEF2P13639 858 aaKnown RBP12□□□□□ -0.49
TPM4-207ENST00000588032 VCAM1P19320 739 aa12□□□□□ -0.49
TPM4-207ENST00000588032 PSMC4P43686 418 aa12□□□□□ -0.49
TPM4-207ENST00000588032 NT5C2P49902 561 aa12□□□□□ -0.49
TPM4-207ENST00000588032 FCGRTP55899 365 aa12□□□□□ -0.49
TPM4-207ENST00000588032 CATSPERGQ6ZRH7 1159 aa12□□□□□ -0.49
TPM4-207ENST00000588032 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
TPM4-207ENST00000588032 ANKRD13CQ8N6S4 541 aa12□□□□□ -0.49
TPM4-207ENST00000588032 NEDD1Q8NHV4 660 aa12□□□□□ -0.49
TPM4-207ENST00000588032 P2RX7Q99572 595 aaKnown RBP12□□□□□ -0.49
TPM4-207ENST00000588032 DSCC1Q9BVC3 393 aa12□□□□□ -0.49
TPM4-207ENST00000588032 VCPKMTQ9H867 229 aa12□□□□□ -0.49
TPM4-207ENST00000588032 GOPCQ9HD26 462 aa12□□□□□ -0.49
TPM4-207ENST00000588032 CTNNA3Q9UI47 895 aa12□□□□□ -0.49
TPM4-207ENST00000588032 PTPN22Q9Y2R2 807 aa12□□□□□ -0.49
TPM4-207ENST00000588032 RAD50Q92878 1312 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms