RNA–Protein interactions for RNA: ENST00000587480.1

TMC6-208, Transcript of transmembrane channel like 6, human

Gene TMC6, Length 253 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-208	ENST00000587480	RAD50	Q92878	1312 aa		28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	RASA1	P20936	1047 aa		28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	USP14	P54578	494 aa		28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	PPARA	Q07869	468 aa		28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	PABPC4	Q13310	644 aa	Known RBP eCLIP	28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	USP17L2	Q6R6M4	530 aa		28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	TMOD4	Q9NZQ9	345 aa		28.03	■■■□□ 2.08
TMC6-208	ENST00000587480	HOXA7	P31268	230 aa	Predicted RBP	28.02	■■■□□ 2.08
TMC6-208	ENST00000587480	TREML2	Q5T2D2	321 aa		28.02	■■■□□ 2.08
TMC6-208	ENST00000587480	CWC27	Q6UX04	472 aa	Known RBP	28.02	■■■□□ 2.08
TMC6-208	ENST00000587480	C17orf99	Q6UX52	265 aa		28.02	■■■□□ 2.08
TMC6-208	ENST00000587480	PNMA3	Q9UL41	463 aa		28.02	■■■□□ 2.08
TMC6-208	ENST00000587480	PLIN4	Q96Q06	1357 aa		28.01	■■■□□ 2.07
TMC6-208	ENST00000587480	MPHOSPH10	O00566	681 aa	Known RBP	28.01	■■■□□ 2.07
TMC6-208	ENST00000587480	SLC3A2	P08195	630 aa	Known RBP	28.01	■■■□□ 2.07
TMC6-208	ENST00000587480	SP3	Q02447	781 aa		28.01	■■■□□ 2.07
TMC6-208	ENST00000587480	CTU1	Q7Z7A3	348 aa	Known RBP	28.01	■■■□□ 2.07
TMC6-208	ENST00000587480	FGA	P02671	866 aa		28	■■■□□ 2.07
TMC6-208	ENST00000587480	PDE4B	Q07343	736 aa		28	■■■□□ 2.07
TMC6-208	ENST00000587480	ERO1A	Q96HE7	468 aa		28	■■■□□ 2.07
TMC6-208	ENST00000587480	MKNK2	Q9HBH9	465 aa		28	■■■□□ 2.07
TMC6-208	ENST00000587480	EMILIN3	Q9NT22	766 aa		28	■■■□□ 2.07
TMC6-208	ENST00000587480	TNS4	Q8IZW8	715 aa		27.99	■■■□□ 2.07
TMC6-208	ENST00000587480	ACER1	Q8TDN7	264 aa		27.99	■■■□□ 2.07
TMC6-208	ENST00000587480	FEZ1	Q99689	392 aa		27.99	■■■□□ 2.07
TMC6-208	ENST00000587480	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	27.99	■■■□□ 2.07
TMC6-208	ENST00000587480	KANSL2	Q9H9L4	492 aa		27.99	■■■□□ 2.07
TMC6-208	ENST00000587480	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	27.99	■■■□□ 2.07
TMC6-208	ENST00000587480	FGR	P09769	529 aa		27.98	■■■□□ 2.07
TMC6-208	ENST00000587480	BCR	P11274	1271 aa		27.98	■■■□□ 2.07
TMC6-208	ENST00000587480	CHML	P26374	656 aa		27.98	■■■□□ 2.07
TMC6-208	ENST00000587480	ICA1	Q05084	483 aa		27.98	■■■□□ 2.07
TMC6-208	ENST00000587480	SIAH1	Q8IUQ4	282 aa		27.98	■■■□□ 2.07
TMC6-208	ENST00000587480	DSCC1	Q9BVC3	393 aa		27.98	■■■□□ 2.07
TMC6-208	ENST00000587480		A0A1W2PRG0	241 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	CYP2C8	P10632	490 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	DGKZ	Q13574	1117 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	PKN2	Q16513	984 aa	Known RBP	27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	BMP2KL	Q5H9B9	411 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	RUFY2	Q8WXA3	655 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	SH2D4A	Q9H788	454 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	ARHGEF10L	Q9HCE6	1279 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	TMX2	Q9Y320	296 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	LAMA4	Q16363	1823 aa		27.97	■■■□□ 2.07
TMC6-208	ENST00000587480	IGKV6D-41	A0A0C4DH26	115 aa		27.96	■■■□□ 2.07
TMC6-208	ENST00000587480	OSBP	P22059	807 aa		27.96	■■■□□ 2.07
TMC6-208	ENST00000587480	ASCC2	Q9H1I8	757 aa	Predicted RBP	27.96	■■■□□ 2.07
TMC6-208	ENST00000587480	ORC4	O43929	436 aa		27.95	■■■□□ 2.06
TMC6-208	ENST00000587480	PC	P11498	1178 aa	Known RBP	27.95	■■■□□ 2.06
TMC6-208	ENST00000587480	ZNF444	Q8N0Y2	327 aa	Predicted RBP	27.95	■■■□□ 2.06
TMC6-208	ENST00000587480	PPP4R2	Q9NY27	417 aa		27.95	■■■□□ 2.06
TMC6-208	ENST00000587480	SYNPO2	Q9UMS6	1093 aa		27.95	■■■□□ 2.06
TMC6-208	ENST00000587480	VCAM1	P19320	739 aa		27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	GCLC	P48506	637 aa	Predicted RBP	27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	LACTB	P83111	547 aa	Predicted RBP	27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	LPAR1	Q92633	364 aa		27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	IL25	Q9H293	177 aa		27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	NYAP2	Q9P242	653 aa		27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	CPA4	Q9UI42	421 aa		27.94	■■■□□ 2.06
TMC6-208	ENST00000587480	NT5C2	P49902	561 aa		27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	ARHGEF6	Q15052	776 aa		27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	NEDD1	Q8NHV4	660 aa		27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	CD99L2	Q8TCZ2	262 aa		27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	SMCR8	Q8TEV9	937 aa	Predicted RBP	27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	MCOLN1	Q9GZU1	580 aa		27.93	■■■□□ 2.06
TMC6-208	ENST00000587480	PRDM1	O75626	825 aa		27.92	■■■□□ 2.06
TMC6-208	ENST00000587480	EEF2	P13639	858 aa	Known RBP	27.92	■■■□□ 2.06
TMC6-208	ENST00000587480	IRX3	P78415	501 aa	Predicted RBP	27.92	■■■□□ 2.06
TMC6-208	ENST00000587480	FAM110C	Q1W6H9	321 aa		27.92	■■■□□ 2.06
TMC6-208	ENST00000587480	CLEC10A	Q8IUN9	316 aa		27.92	■■■□□ 2.06
TMC6-208	ENST00000587480	VCPKMT	Q9H867	229 aa		27.92	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L15	C9J2P7	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L13	C9JLJ4	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L11	C9JVI0	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L18	D6R9N7	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L22	D6RA61	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L17	D6RBQ6	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L19	D6RCP7	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L20	D6RJB6	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	SGSM2	O43147	1006 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	GNRH1	P01148	92 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	CTDSPL2	Q05D32	466 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	USP17L24	Q0WX57	530 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	ZYX	Q15942	572 aa	Known RBP	27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	OTOP1	Q7RTM1	612 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	STK11IP	Q8N1F8	1099 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	TACC3	Q9Y6A5	838 aa		27.91	■■■□□ 2.06
TMC6-208	ENST00000587480	HTT	P42858	3142 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	CAP1	Q01518	475 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	KIF22	Q14807	665 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	PPP4R3B	Q5MIZ7	849 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	LBX2	Q6XYB7	198 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	CATSPERG	Q6ZRH7	1159 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	STAG1	Q8WVM7	1258 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	NBPF3	Q9H094	633 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	MTMR4	Q9NYA4	1195 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	MORF4L1	Q9UBU8	362 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	CTNNA3	Q9UI47	895 aa		27.9	■■■□□ 2.06
TMC6-208	ENST00000587480	HERVK_113	P62684	666 aa		27.89	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms