RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PTPN18Q99952 460 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 DSCC1Q9BVC3 393 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 TOMM22Q9NS69 142 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 SAGE1Q9NXZ1 904 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 TMOD4Q9NZQ9 345 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 TSKSQ9UJT2 592 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 ANAPC4Q9UJX5 808 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 OTOFQ9HC10 1997 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 SIPA1L1O43166 1804 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 RAD50Q92878 1312 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 BTBD19C9JJ37 291 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 PDHXO00330 501 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 CDC45O75419 566 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 TSPY3P0CV98 308 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 TSPY8P0CW00 308 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 RASA1P20936 1047 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 GUCY1A2P33402 732 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 LBX1P52954 281 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 HMGCS2P54868 508 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 TFAP4Q01664 338 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 MTMR2Q13614 643 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 TAF1CQ15572 869 aaPredicted RBP7.77□□□□□ -1.17
NPC1-206ENST00000587223 IMMTQ16891 758 aaKnown RBP7.77□□□□□ -1.17
NPC1-206ENST00000587223 RRP12Q5JTH9 1297 aaKnown RBP7.77□□□□□ -1.17
NPC1-206ENST00000587223 USP17L2Q6R6M4 530 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 MFSD6Q6ZSS7 791 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ANKRD23Q86SG2 305 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 SPRYD3Q8NCJ5 442 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ACER1Q8TDN7 264 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 FEZ1Q99689 392 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ESYT1Q9BSJ8 1104 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 IL25Q9H293 177 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 KANSL2Q9H9L4 492 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ARHGEF10LQ9HCE6 1279 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ZCCHC17Q9NP64 241 aaKnown RBP7.77□□□□□ -1.17
NPC1-206ENST00000587223 INCENPQ9NQS7 918 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 DOCK1Q14185 1865 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ZMYM6O95789 1325 aa7.77□□□□□ -1.17
NPC1-206ENST00000587223 ROBO3Q96MS0 1386 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 TSPY2A6NKD2 308 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 RANBP6O60518 1105 aaKnown RBP7.76□□□□□ -1.17
NPC1-206ENST00000587223 HSPA8P11142 646 aaKnown RBP7.76□□□□□ -1.17
NPC1-206ENST00000587223 USP14P54578 494 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 PTH1RQ03431 593 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 ICA1Q05084 483 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 PABPC4Q13310 644 aaKnown RBP eCLIP7.76□□□□□ -1.17
NPC1-206ENST00000587223 MOGSQ13724 837 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 ZYXQ15942 572 aaKnown RBP7.76□□□□□ -1.17
NPC1-206ENST00000587223 SH3D19Q5HYK7 790 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 FAM47AQ5JRC9 791 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 AKNAD1Q5T1N1 836 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 GPAT2Q6NUI2 795 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 PROCA1Q8NCQ7 364 aaPredicted RBP7.76□□□□□ -1.17
NPC1-206ENST00000587223 NEDD1Q8NHV4 660 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 KIAA1683Q9H0B3 1180 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 RNF41Q9H4P4 317 aaPredicted RBP7.76□□□□□ -1.17
NPC1-206ENST00000587223 SH2D4AQ9H788 454 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 EMILIN3Q9NT22 766 aa7.76□□□□□ -1.17
NPC1-206ENST00000587223 ATAD5Q96QE3 1844 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 DDX60LQ5H9U9 1706 aaKnown RBP7.75□□□□□ -1.17
NPC1-206ENST00000587223 A0A1W2PRG0 241 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 GPR25O00155 361 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 ORC4O43929 436 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 RAD21O60216 631 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 FGRP09769 529 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 PCP11498 1178 aaKnown RBP7.75□□□□□ -1.17
NPC1-206ENST00000587223 EEF2P13639 858 aaKnown RBP7.75□□□□□ -1.17
NPC1-206ENST00000587223 OSBPP22059 807 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 CRHR2Q13324 411 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 DGKZQ13574 1117 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 TREML2Q5T2D2 321 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 CLEC10AQ8IUN9 316 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 SIAH1Q8IUQ4 282 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 SPDYE1Q8NFV5 336 aaPredicted RBP7.75□□□□□ -1.17
NPC1-206ENST00000587223 MAP4K1Q92918 833 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 PARK7Q99497 189 aaKnown RBP7.75□□□□□ -1.17
NPC1-206ENST00000587223 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
NPC1-206ENST00000587223 CFHR5Q9BXR6 569 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 R3HDMLQ9H3Y0 253 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 ANO2Q9NQ90 1003 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 CLIP2Q9UDT6 1046 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 AGTPBP1Q9UPW5 1226 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
NPC1-206ENST00000587223 SLC45A1Q9Y2W3 748 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 TMX2Q9Y320 296 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 MYH8P13535 1937 aa7.75□□□□□ -1.17
NPC1-206ENST00000587223 THSD7BQ9C0I4 1608 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 PHIPQ8WWQ0 1821 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L15C9J2P7 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L13C9JLJ4 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L11C9JVI0 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L18D6R9N7 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L22D6RA61 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L17D6RBQ6 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L19D6RCP7 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 USP17L20D6RJB6 530 aa7.74□□□□□ -1.17
NPC1-206ENST00000587223 TLR2O60603 784 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms