RNA–Protein interactions for RNA: ENST00000587136.1

PTBP1-212, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-212ENST00000587136 ZSWIM8A7E2V4 1837 aa25.15■■□□□ 1.62
PTBP1-212ENST00000587136 AKR1B1P15121 316 aa25.15■■□□□ 1.62
PTBP1-212ENST00000587136 USP17L2Q6R6M4 530 aa25.15■■□□□ 1.62
PTBP1-212ENST00000587136 C17orf99Q6UX52 265 aa25.15■■□□□ 1.62
PTBP1-212ENST00000587136 STK11IPQ8N1F8 1099 aa25.15■■□□□ 1.62
PTBP1-212ENST00000587136 CPA4Q9UI42 421 aa25.15■■□□□ 1.62
PTBP1-212ENST00000587136 MYH4Q9Y623 1939 aa25.14■■□□□ 1.62
PTBP1-212ENST00000587136 PKN2Q16513 984 aaKnown RBP25.14■■□□□ 1.62
PTBP1-212ENST00000587136 MKNK2Q9HBH9 465 aa25.14■■□□□ 1.62
PTBP1-212ENST00000587136 ZNF287Q9HBT7 754 aa25.14■■□□□ 1.62
PTBP1-212ENST00000587136 CCDC171Q6TFL3 1326 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 FOXP2O15409 715 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 GSPT1P15170 499 aaKnown RBP25.13■■□□□ 1.61
PTBP1-212ENST00000587136 OSBPP22059 807 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 USP14P54578 494 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 MFAP1P55081 439 aaKnown RBP25.13■■□□□ 1.61
PTBP1-212ENST00000587136 ZYXQ15942 572 aaKnown RBP25.13■■□□□ 1.61
PTBP1-212ENST00000587136 VPS53Q5VIR6 699 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 ACER1Q8TDN7 264 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 SMCR8Q8TEV9 937 aaPredicted RBP25.13■■□□□ 1.61
PTBP1-212ENST00000587136 KIAA1683Q9H0B3 1180 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 EMILIN3Q9NT22 766 aa25.13■■□□□ 1.61
PTBP1-212ENST00000587136 SLC3A2P08195 630 aaKnown RBP25.12■■□□□ 1.61
PTBP1-212ENST00000587136 PPARAQ07869 468 aa25.12■■□□□ 1.61
PTBP1-212ENST00000587136 KIF22Q14807 665 aa25.12■■□□□ 1.61
PTBP1-212ENST00000587136 ARHGEF6Q15052 776 aa25.12■■□□□ 1.61
PTBP1-212ENST00000587136 ZNF589Q86UQ0 364 aaPredicted RBP25.12■■□□□ 1.61
PTBP1-212ENST00000587136 C12orf42Q96LP6 360 aa25.12■■□□□ 1.61
PTBP1-212ENST00000587136 TRIM17Q9Y577 477 aa25.12■■□□□ 1.61
PTBP1-212ENST00000587136 RASA1P20936 1047 aa25.11■■□□□ 1.61
PTBP1-212ENST00000587136 ALX1Q15699 326 aa25.11■■□□□ 1.61
PTBP1-212ENST00000587136 CWC27Q6UX04 472 aaKnown RBP25.11■■□□□ 1.61
PTBP1-212ENST00000587136 ABHD8Q96I13 439 aa25.11■■□□□ 1.61
PTBP1-212ENST00000587136 ARHGEF10LQ9HCE6 1279 aa25.11■■□□□ 1.61
PTBP1-212ENST00000587136 HSPD1P10809 573 aaKnown RBP25.1■■□□□ 1.61
PTBP1-212ENST00000587136 HOXA7P31268 230 aaPredicted RBP25.1■■□□□ 1.61
PTBP1-212ENST00000587136 IRX3P78415 501 aaPredicted RBP25.1■■□□□ 1.61
PTBP1-212ENST00000587136 LACTBP83111 547 aaPredicted RBP25.1■■□□□ 1.61
PTBP1-212ENST00000587136 ICA1Q05084 483 aa25.1■■□□□ 1.61
PTBP1-212ENST00000587136 PDE4BQ07343 736 aa25.1■■□□□ 1.61
PTBP1-212ENST00000587136 OTOP1Q7RTM1 612 aa25.1■■□□□ 1.61
PTBP1-212ENST00000587136 CCDC136Q96JN2 1154 aa25.1■■□□□ 1.61
PTBP1-212ENST00000587136 ASCC2Q9H1I8 757 aaPredicted RBP25.1■■□□□ 1.61
PTBP1-212ENST00000587136 EFCC1Q9HA90 598 aa25.1■■□□□ 1.61
PTBP1-212ENST00000587136 BCRP11274 1271 aa25.09■■□□□ 1.61
PTBP1-212ENST00000587136 ZNF444Q8N0Y2 327 aaPredicted RBP25.09■■□□□ 1.61
PTBP1-212ENST00000587136 KANSL2Q9H9L4 492 aa25.09■■□□□ 1.61
PTBP1-212ENST00000587136 LAMA4Q16363 1823 aa25.09■■□□□ 1.61
PTBP1-212ENST00000587136 A0A1W2PRG0 241 aa25.08■■□□□ 1.61
PTBP1-212ENST00000587136 FBXO46Q6PJ61 603 aaPredicted RBP25.08■■□□□ 1.61
PTBP1-212ENST00000587136 CLEC10AQ8IUN9 316 aa25.08■■□□□ 1.61
PTBP1-212ENST00000587136 SH2D4AQ9H788 454 aa25.08■■□□□ 1.61
PTBP1-212ENST00000587136 ZMYM6O95789 1325 aa25.08■■□□□ 1.6
PTBP1-212ENST00000587136 DOCK3Q8IZD9 2030 aa25.07■■□□□ 1.6
PTBP1-212ENST00000587136 PRDM1O75626 825 aa25.07■■□□□ 1.6
PTBP1-212ENST00000587136 GCLCP48506 637 aaPredicted RBP25.07■■□□□ 1.6
PTBP1-212ENST00000587136 FGAP02671 866 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 VCAM1P19320 739 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 CAP1Q01518 475 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 CTDSPL2Q05D32 466 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 SIAH1Q8IUQ4 282 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 ANKRD13CQ8N6S4 541 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 ANAPC4Q9UJX5 808 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 TMX2Q9Y320 296 aa25.06■■□□□ 1.6
PTBP1-212ENST00000587136 PARP14Q460N5 1801 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L15C9J2P7 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L13C9JLJ4 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L11C9JVI0 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L18D6R9N7 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L22D6RA61 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L17D6RBQ6 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L19D6RCP7 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L20D6RJB6 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 EEF2P13639 858 aaKnown RBP25.05■■□□□ 1.6
PTBP1-212ENST00000587136 ATP2B2Q01814 1243 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 USP17L24Q0WX57 530 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.05■■□□□ 1.6
PTBP1-212ENST00000587136 ARHGAP39Q9C0H5 1083 aa25.05■■□□□ 1.6
PTBP1-212ENST00000587136 ECM2O94769 699 aaPredicted RBP25.04■■□□□ 1.6
PTBP1-212ENST00000587136 GNRH1P01148 92 aa25.04■■□□□ 1.6
PTBP1-212ENST00000587136 PSMC4P43686 418 aa25.04■■□□□ 1.6
PTBP1-212ENST00000587136 FAM110CQ1W6H9 321 aa25.04■■□□□ 1.6
PTBP1-212ENST00000587136 P2RX7Q99572 595 aaKnown RBP25.04■■□□□ 1.6
PTBP1-212ENST00000587136 PTPN22Q9Y2R2 807 aa25.04■■□□□ 1.6
PTBP1-212ENST00000587136 HERVK_113P62684 666 aa25.03■■□□□ 1.6
PTBP1-212ENST00000587136 CATSPERGQ6ZRH7 1159 aa25.03■■□□□ 1.6
PTBP1-212ENST00000587136 GTF3C2Q8WUA4 911 aaPredicted RBP25.03■■□□□ 1.6
PTBP1-212ENST00000587136 RUFY2Q8WXA3 655 aa25.03■■□□□ 1.6
PTBP1-212ENST00000587136 RPAP3Q9H6T3 665 aaPredicted RBP25.03■■□□□ 1.6
PTBP1-212ENST00000587136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.03■■□□□ 1.65e-6■■□□□ 13.5
PTBP1-212ENST00000587136 RLFQ13129 1914 aa25.03■■□□□ 1.6
PTBP1-212ENST00000587136 CAPN15O75808 1086 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 FMNL1O95466 1100 aaPredicted RBP25.02■■□□□ 1.6
PTBP1-212ENST00000587136 TSPY3P0CV98 308 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 TSPY8P0CW00 308 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 FCGRTP55899 365 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 NEDD1Q8NHV4 660 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 LPAR1Q92633 364 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 VCPKMTQ9H867 229 aa25.02■■□□□ 1.6
PTBP1-212ENST00000587136 NYAP2Q9P242 653 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms