RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-204ENST00000586253 DEFB115Q30KQ5 88 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 ZMYM1Q5SVZ6 1142 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 LDLRAD1Q5T700 205 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 SH3BP5LQ7L8J4 393 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 ZSCAN29Q8IWY8 852 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-204ENST00000586253 LCORLQ8N3X6 602 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 OSBP2Q969R2 916 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
SMAD4-204ENST00000586253 ARMT1Q9H993 441 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 PI4KBQ9UBF8 816 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
SMAD4-204ENST00000586253 ANGEL1Q9UNK9 670 aaKnown RBP9.63□□□□□ -0.87
SMAD4-204ENST00000586253 NAV1Q8NEY1 1877 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 DDTLA6NHG4 134 aaPredicted RBP9.62□□□□□ -0.87
SMAD4-204ENST00000586253 CHGBP05060 677 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
SMAD4-204ENST00000586253 COPS2P61201 443 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 HTRA3P83110 453 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 SLFNL1Q499Z3 407 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 RGMBQ6NW40 437 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 GIMAP6Q6P9H5 292 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 METTL16Q86W50 562 aaKnown RBP9.62□□□□□ -0.87
SMAD4-204ENST00000586253 MAPKAPK5Q8IW41 473 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 ANKRD13AQ8IZ07 590 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 DNAJC5GQ8N7S2 189 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 RILPL2Q969X0 211 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 CCDC102AQ96A19 550 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 STRBPQ96SI9 672 aaKnown RBP9.62□□□□□ -0.87
SMAD4-204ENST00000586253 ZNF341Q9BYN7 854 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 HELLSQ9NRZ9 838 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 HERC5Q9UII4 1024 aaKnown RBP9.62□□□□□ -0.87
SMAD4-204ENST00000586253 OTOFQ9HC10 1997 aa9.62□□□□□ -0.87
SMAD4-204ENST00000586253 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 UBE2Q2LH0YL09 131 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 M0R2C6 588 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 GPAA1O43292 621 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 HLA-DOAP06340 250 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 PRKG1Q13976 671 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 MOB2Q70IA6 237 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 TTC6Q86TZ1 520 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 FOXP4Q8IVH2 680 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-204ENST00000586253 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
SMAD4-204ENST00000586253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMAD4-204ENST00000586253 SDR42E1Q8WUS8 393 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 EHD4Q9H223 541 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 DCP1AQ9NPI6 582 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-204ENST00000586253 ZNF112Q9UJU3 913 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 SIPA1L1O43166 1804 aa9.61□□□□□ -0.87
SMAD4-204ENST00000586253 WDR33Q9C0J8 1336 aaKnown RBP9.6□□□□□ -0.87
SMAD4-204ENST00000586253 SLC10A3P09131 477 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 SDSP20132 328 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 ZNF157P51786 506 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-204ENST00000586253 NOGQ13253 232 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 MCMDC2Q4G0Z9 681 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 NOL9Q5SY16 702 aaKnown RBP9.6□□□□□ -0.87
SMAD4-204ENST00000586253 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-204ENST00000586253 TRIM67Q6ZTA4 783 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 MIGA2Q7L4E1 593 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 RASAL3Q86YV0 1011 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 CAPNS2Q96L46 248 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 WRNIP1Q96S55 665 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 MCM9Q9NXL9 1143 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 DAXXQ9UER7 740 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-204ENST00000586253 PALD1Q9ULE6 856 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 FZD1Q9UP38 647 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 CSADQ9Y600 493 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 LAMB1P07942 1786 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 CEP350Q5VT06 3117 aa9.6□□□□□ -0.87
SMAD4-204ENST00000586253 BAZ2AQ9UIF9 1905 aaKnown RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 A0A0D9SFI3 127 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 GSG1L2A8MUP6 293 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 PHF20L1A8MW92 1017 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 FAM155AB1AL88 458 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 PRKAB2O43741 272 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 CTNND1O60716 968 aaKnown RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 ZBTB48P10074 688 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 MAP2K2P36507 400 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 VEGFBP49765 207 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 NMIQ13287 307 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 VGLL4Q14135 290 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 BMP2KLQ5H9B9 411 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 AMOTL1Q8IY63 956 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 FAM227BQ96M60 508 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 SEC62Q99442 399 aaKnown RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 TRIM34Q9BYJ4 488 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 NACAP1Q9BZK3 213 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 DIAPH3Q9NSV4 1193 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 ARPP21Q9UBL0 812 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms