RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L12C9JPN9 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L21D6R901 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 C12orf60Q5U649 245 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 KBTBD3Q8NAB2 608 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 RBPJLQ9UBG7 517 aa20.63■□□□□ 0.89
ITGB4-213ENST00000584939 MGAMO43451 1857 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 NAV1Q8NEY1 1877 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 KIAA0100Q14667 2235 aaKnown RBP20.62■□□□□ 0.89
ITGB4-213ENST00000584939 CYP2D7A0A087X1C5 515 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 INHAP05111 366 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 GJB1P08034 283 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 AMOTL1Q8IY63 956 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 EXOC6Q8TAG9 804 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 NKX2-3Q8TAU0 364 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 GTF3C2Q8WUA4 911 aaPredicted RBP20.62■□□□□ 0.89
ITGB4-213ENST00000584939 UNC93B1Q9H1C4 597 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 GJD2Q9UKL4 321 aa20.62■□□□□ 0.89
ITGB4-213ENST00000584939 SMIM22K7EJ46 135 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 VCAM1P19320 739 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 Q3C1V9 767 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 POTEEQ6S8J3 1075 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 CATSPERGQ6ZRH7 1159 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 TMEM179Q6ZVK1 233 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 PAGR1Q9BTK6 254 aa20.61■□□□□ 0.89
ITGB4-213ENST00000584939 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 RNF113AO15541 343 aaKnown RBP20.6■□□□□ 0.89
ITGB4-213ENST00000584939 GJA8P48165 433 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 CDK8P49336 464 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 ERVK-9P63128 1117 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 ERVK-24P63145 666 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 CTR9Q6PD62 1173 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 OTUD7AQ8TE49 926 aaPredicted RBP20.6■□□□□ 0.89
ITGB4-213ENST00000584939 SHISA4Q96DD7 197 aa20.6■□□□□ 0.89
ITGB4-213ENST00000584939 STRBPQ96SI9 672 aaKnown RBP20.6■□□□□ 0.89
ITGB4-213ENST00000584939 CENPFP49454 3210 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 A0A1W2PRG0 241 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 ERC2O15083 957 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
ITGB4-213ENST00000584939 APPBP2Q92624 585 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 OSBP2Q969R2 916 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 CCDC17Q96LX7 622 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 RPAP3Q9H6T3 665 aaPredicted RBP20.59■□□□□ 0.89
ITGB4-213ENST00000584939 PDE4DIPQ5VU43 2346 aa20.59■□□□□ 0.89
ITGB4-213ENST00000584939 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.89
ITGB4-213ENST00000584939 AKR1B1P15121 316 aa20.58■□□□□ 0.89
ITGB4-213ENST00000584939 MAPK4P31152 587 aa20.58■□□□□ 0.89
ITGB4-213ENST00000584939 HDAC1Q13547 482 aaPredicted RBP20.58■□□□□ 0.89
ITGB4-213ENST00000584939 C16orf86Q6ZW13 317 aa20.58■□□□□ 0.89
ITGB4-213ENST00000584939 U2AF1L4Q8WU68 220 aaKnown RBP20.58■□□□□ 0.89
ITGB4-213ENST00000584939 RABGAP1Q9Y3P9 1069 aa20.58■□□□□ 0.89
ITGB4-213ENST00000584939 GLRX3O76003 335 aaKnown RBP20.57■□□□□ 0.88
ITGB4-213ENST00000584939 SIAH1Q8IUQ4 282 aa20.57■□□□□ 0.88
ITGB4-213ENST00000584939 PI4K2BQ8TCG2 481 aa20.57■□□□□ 0.88
ITGB4-213ENST00000584939 NUDT12Q9BQG2 462 aa20.57■□□□□ 0.88
ITGB4-213ENST00000584939 PORCNQ9H237 461 aa20.57■□□□□ 0.88
ITGB4-213ENST00000584939 ARPP21Q9UBL0 812 aaPredicted RBP20.57■□□□□ 0.88
ITGB4-213ENST00000584939 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
ITGB4-213ENST00000584939 GSG1L2A8MUP6 293 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 CNMDO75829 334 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 SGPL1O95470 568 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 CYP2B6P20813 491 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 AAMPQ13685 434 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
ITGB4-213ENST00000584939 ANKRD45Q5TZF3 282 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 CLEC10AQ8IUN9 316 aa20.56■□□□□ 0.88
ITGB4-213ENST00000584939 HMGCRP04035 888 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 MX1P20591 662 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 ICA1Q05084 483 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 GIMAP6Q6P9H5 292 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 LBX2Q6XYB7 198 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 PLEKHH3Q7Z736 793 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 SOCS4Q8WXH5 440 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 ARHGEF10LQ9HCE6 1279 aa20.55■□□□□ 0.88
ITGB4-213ENST00000584939 SPDYE16A6NNV3 312 aaPredicted RBP20.54■□□□□ 0.88
ITGB4-213ENST00000584939 M0R2C6 588 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 GPAA1O43292 621 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 CCNA1P78396 465 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 SBK1Q52WX2 424 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 DEFB118Q96PH6 123 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 TANGO6Q9C0B7 1094 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 CWC22Q9HCG8 908 aaKnown RBP20.54■□□□□ 0.88
ITGB4-213ENST00000584939 PAK6Q9NQU5 681 aaPredicted RBP20.54■□□□□ 0.88
ITGB4-213ENST00000584939 BTBD7Q9P203 1132 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 TMX2Q9Y320 296 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 MYH7P12883 1935 aa20.54■□□□□ 0.88
ITGB4-213ENST00000584939 MINDY4BA8MYZ0 360 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 IGHDP01880 384 aa20.53■□□□□ 0.88
ITGB4-213ENST00000584939 TFRCP02786 760 aaKnown RBP20.53■□□□□ 0.88
ITGB4-213ENST00000584939 XRCC5P13010 732 aaKnown RBP20.53■□□□□ 0.88
ITGB4-213ENST00000584939 GNAT2P19087 354 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms