RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 CCDC34Q96HJ3 373 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 TIGD1Q96MW7 591 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 MRPL44Q9H9J2 332 aaKnown RBP20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 WDR19Q8NEZ3 1342 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 TRIM75PA6NK02 468 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 RILPL1Q5EBL4 403 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 TC2NQ8N9U0 490 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 VPS16Q9H269 839 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 CTNND2Q9UQB3 1225 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 ERVV-1B6SEH8 477 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 USP17L8P0C7I0 530 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 TMEM139Q8IV31 216 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 SRBD1Q8N5C6 995 aaKnown RBP20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 ECM29Q5VYK3 1845 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 GOLGA8HP0CJ92 632 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 SLC44A5Q8NCS7 719 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 PUF60Q9UHX1 559 aaKnown RBP20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 MYH3P11055 1940 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 RBL2Q08999 1139 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 DHX8Q14562 1220 aaKnown RBP20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 SEC23AQ15436 765 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 CTR9Q6PD62 1173 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 CATIPQ7Z7H3 387 aa20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 FAM84BQ96KN1 310 aaPredicted RBP20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 ZCCHC17Q9NP64 241 aaKnown RBP20.55■□□□□ 0.88
CUEDC1-212ENST00000584746 ATRNO75882 1429 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 PIP4K2BP78356 416 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 ALX1Q15699 326 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 WASF1Q92558 559 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 UBXN4Q92575 508 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 RIOK1Q9BRS2 568 aaKnown RBP20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 MECOMQ03112 1051 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 SPECC1LQ69YQ0 1117 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 PAPPAQ13219 1627 aa20.54■□□□□ 0.88
CUEDC1-212ENST00000584746 CBFA2T2O43439 604 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 KRT2P35908 639 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 GYS2P54840 703 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 NLRP5P59047 1200 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 AMIGO3Q86WK7 504 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 RASSF8Q8NHQ8 419 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 PAGE5Q96GU1 130 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 HINFPQ9BQA5 517 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 FOXP1Q9H334 677 aaPredicted RBP20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 SRPRBQ9Y5M8 271 aaKnown RBP20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 RNF225M0QZC1 329 aaPredicted RBP20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 MORC3Q14149 939 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 DIXDC1Q155Q3 683 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 FAM98CQ17RN3 349 aaKnown RBP20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 STAG2Q8N3U4 1231 aa20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 SAP30BPQ9UHR5 308 aaKnown RBP20.53■□□□□ 0.88
CUEDC1-212ENST00000584746 CUL4BQ13620 913 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 TRERF1Q96PN7 1200 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 USP17L3A6NCW0 530 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 USP17L4A6NCW7 530 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 TSPY2A6NKD2 308 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 CAVIN4Q5BKX8 364 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 USP17L1Q7RTZ2 530 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 CCDC12Q8WUD4 166 aaPredicted RBP20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 GDAQ9Y2T3 454 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
CUEDC1-212ENST00000584746 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.87
CUEDC1-212ENST00000584746 TRIM49BA6NDI0 452 aa20.52■□□□□ 0.87
CUEDC1-212ENST00000584746 CASP14P31944 242 aa20.52■□□□□ 0.87
CUEDC1-212ENST00000584746 GRIK5Q16478 980 aa20.52■□□□□ 0.87
CUEDC1-212ENST00000584746 IGSF22Q8N9C0 903 aa20.52■□□□□ 0.87
CUEDC1-212ENST00000584746 ACRBPQ8NEB7 543 aa20.52■□□□□ 0.87
CUEDC1-212ENST00000584746 MYH14Q7Z406 1995 aaKnown RBP20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 IL17AQ16552 155 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 IQCA1Q86XH1 822 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 RNF41Q9H4P4 317 aaPredicted RBP20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 TAB2Q9NYJ8 693 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 MYH13Q9UKX3 1938 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 CCDC196A0A1B0GTZ2 297 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 TROAPQ12815 778 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 RAD9BQ6WBX8 426 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 LINC00116Q8NCU8 138 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 LRP6O75581 1613 aa20.51■□□□□ 0.87
CUEDC1-212ENST00000584746 CASQ1P31415 396 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 CCDC93Q567U6 631 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 SYNRGQ9UMZ2 1314 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 TTC38Q5R3I4 469 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 FEZ1Q99689 392 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 VAT1LQ9HCJ6 419 aa20.5■□□□□ 0.87
CUEDC1-212ENST00000584746 CHD4Q14839 1912 aa20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 GNAT2P19087 354 aa20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 L2HGDHQ9H9P8 463 aa20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 HOOK1Q9UJC3 728 aaKnown RBP20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 ZNF18P17022 549 aa20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 KRT222Q8N1A0 295 aa20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
CUEDC1-212ENST00000584746 MTRQ99707 1265 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms