RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 SRGAP1Q7Z6B7 1085 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 FAM71BQ8TC56 605 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 L1RE1Q9UN81 338 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 TCRBV5S4A2TA0A5A2 114 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 EXOSC10Q01780 885 aaKnown RBP14.47□□□□□ -0.09
ITGB4-212ENST00000584558 CHRNDQ07001 517 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 SCRN1Q12765 414 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 HNRNPLLQ8WVV9 542 aaKnown RBP14.47□□□□□ -0.09
ITGB4-212ENST00000584558 KAT2BQ92831 832 aa14.47□□□□□ -0.09
ITGB4-212ENST00000584558 CBFA2T2O43439 604 aa14.46□□□□□ -0.09
ITGB4-212ENST00000584558 TMEM139Q8IV31 216 aa14.46□□□□□ -0.09
ITGB4-212ENST00000584558 AGXT2Q9BYV1 514 aa14.46□□□□□ -0.09
ITGB4-212ENST00000584558 TNRC6CQ9HCJ0 1690 aaKnown RBP14.46□□□□□ -0.09
ITGB4-212ENST00000584558 CUTAO60888 179 aa14.46□□□□□ -0.1
ITGB4-212ENST00000584558 RASGRF1Q13972 1273 aa14.46□□□□□ -0.1
ITGB4-212ENST00000584558 UBE3CQ15386 1083 aa14.46□□□□□ -0.1
ITGB4-212ENST00000584558 VSTM4Q8IW00 320 aa14.46□□□□□ -0.1
ITGB4-212ENST00000584558 ARHGEF1Q92888 912 aaKnown RBP14.46□□□□□ -0.1
ITGB4-212ENST00000584558 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.46□□□□□ -0.1
ITGB4-212ENST00000584558 UBR3Q6ZT12 1888 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 E7EWF7 191 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 HMGB1P09429 215 aaKnown RBP14.45□□□□□ -0.1
ITGB4-212ENST00000584558 WASHC4Q2M389 1173 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 SPATA5Q8NB90 893 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 CDC5LQ99459 802 aaKnown RBP14.45□□□□□ -0.1
ITGB4-212ENST00000584558 LZTFL1Q9NQ48 299 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 RTCBQ9Y3I0 505 aaKnown RBP14.45□□□□□ -0.1
ITGB4-212ENST00000584558 ADKP55263 362 aaKnown RBP14.45□□□□□ -0.1
ITGB4-212ENST00000584558 FBXW10Q5XX13 1052 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 BICDL1Q6ZP65 573 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 HSD3B7Q9H2F3 369 aa14.45□□□□□ -0.1
ITGB4-212ENST00000584558 GPAA1O43292 621 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 TDO2P48775 406 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 VSNL1P62760 191 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 STK38Q15208 465 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 NAA16Q6N069 864 aaPredicted RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 DHX32Q7L7V1 743 aaKnown RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 PTPDC1A2A3K4 754 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 RNF40O75150 1001 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 CCT2P78371 535 aaKnown RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 EZH2Q15910 746 aaKnown RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 SLC9C2Q5TAH2 1124 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 ADALQ6DHV7 355 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 AFAP1L1Q8TED9 768 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 NYXQ9GZU5 481 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 BSDC1Q9NW68 430 aaPredicted RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 ZNF804BA4D1E1 1349 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 FGAP02671 866 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 TFRCP02786 760 aaKnown RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 PDE6AP16499 860 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
ITGB4-212ENST00000584558 USP5P45974 858 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 ACBD3Q9H3P7 528 aa14.44□□□□□ -0.1
ITGB4-212ENST00000584558 MYH15Q9Y2K3 1946 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 ZPR1O75312 459 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 BCAMP50895 628 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 ANKRD18AQ8IVF6 992 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 FBXL16Q8N461 479 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 NSUN7Q8NE18 718 aaKnown RBP14.43□□□□□ -0.1
ITGB4-212ENST00000584558 CLIC6Q96NY7 704 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
ITGB4-212ENST00000584558 RAB21Q9UL25 225 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 ZNF532Q9HCE3 1301 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 LRRIQ3A6PVS8 624 aaPredicted RBP14.43□□□□□ -0.1
ITGB4-212ENST00000584558 IKBKBO14920 756 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 CEP112Q8N8E3 955 aa14.43□□□□□ -0.1
ITGB4-212ENST00000584558 MRPL44Q9H9J2 332 aaKnown RBP14.43□□□□□ -0.1
ITGB4-212ENST00000584558 KIF1CO43896 1103 aaKnown RBP14.42□□□□□ -0.1
ITGB4-212ENST00000584558 ZNF202O95125 648 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 MYL5Q02045 173 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 SMARCC2Q8TAQ2 1214 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 CELF1Q92879 486 aaKnown RBP14.42□□□□□ -0.1
ITGB4-212ENST00000584558 RABEP2Q9H5N1 569 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 NEDD4P46934 1319 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 COL1A1P02452 1464 aaPredicted RBP14.42□□□□□ -0.1
ITGB4-212ENST00000584558 IDH1O75874 414 aaKnown RBP14.42□□□□□ -0.1
ITGB4-212ENST00000584558 CCT5P48643 541 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 MTF1Q14872 753 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 MSANTD4Q8NCY6 345 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 FAM107BQ9H098 131 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 NCOA5Q9HCD5 579 aaKnown RBP14.42□□□□□ -0.1
ITGB4-212ENST00000584558 MED4Q9NPJ6 270 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 FANCLQ9NW38 375 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 MINPP1Q9UNW1 487 aa14.42□□□□□ -0.1
ITGB4-212ENST00000584558 CCDC196A0A1B0GTZ2 297 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 TXNRD1Q16881 649 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 NBPF3Q9H094 633 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 CDC23Q9UJX2 597 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 CLIC4Q9Y696 253 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 WTIPA6NIX2 430 aaPredicted RBP14.41□□□□□ -0.1
ITGB4-212ENST00000584558 STX10O60499 249 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 POLR3DP05423 398 aaPredicted RBP14.41□□□□□ -0.1
ITGB4-212ENST00000584558 TM4SF1P30408 202 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 USP8P40818 1118 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 UBE4AQ14139 1066 aa14.41□□□□□ -0.1
ITGB4-212ENST00000584558 KCNV1Q6PIU1 500 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms