RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 DOCK1Q14185 1865 aa13.35□□□□□ -0.27
CCDC84-210ENST00000583842 MYO5AQ9Y4I1 1855 aaKnown RBP13.34□□□□□ -0.27
CCDC84-210ENST00000583842 GDF11O95390 407 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
CCDC84-210ENST00000583842 PDE1AP54750 535 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 CCDC84Q86UT8 332 aaPredicted RBP13.34□□□□□ -0.27
CCDC84-210ENST00000583842 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 RAET1EQ8TD07 263 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.34□□□□□ -0.27
CCDC84-210ENST00000583842 RBPJLQ9UBG7 517 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 GJD2Q9UKL4 321 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 TMX2Q9Y320 296 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 PHIPQ8WWQ0 1821 aa13.34□□□□□ -0.27
CCDC84-210ENST00000583842 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.28
CCDC84-210ENST00000583842 MAPK4P31152 587 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 HERVK_113P62684 666 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 UBXN2AP68543 259 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 COG2Q14746 738 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 TRMT44Q8IYL2 757 aaKnown RBP13.33□□□□□ -0.28
CCDC84-210ENST00000583842 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
CCDC84-210ENST00000583842 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 MYPNQ86TC9 1320 aa13.33□□□□□ -0.28
CCDC84-210ENST00000583842 GJB1P08034 283 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 FLT3LGP49771 235 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 SOX10P56693 466 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 CCNA1P78396 465 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 SEPT2Q15019 361 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 MKL1Q969V6 931 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
CCDC84-210ENST00000583842 GPAA1O43292 621 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 STRNO43815 780 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 NT5C2P49902 561 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 NUCB1Q02818 461 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 PRKCZQ05513 592 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 ALX1Q15699 326 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 IFNL3Q8IZI9 196 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 MB21D1Q8N884 522 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 ACER1Q8TDN7 264 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 FEZ1Q99689 392 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 ADAMTS5Q9UNA0 930 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 CDK5RAP2Q96SN8 1893 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 MYH1P12882 1939 aa13.31□□□□□ -0.28
CCDC84-210ENST00000583842 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 ADCY3O60266 1144 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
CCDC84-210ENST00000583842 VCAM1P19320 739 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 ERVK-24P63145 666 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 CHD1LQ86WJ1 897 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 SOCS4Q8WXH5 440 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
CCDC84-210ENST00000583842 PTPRFP10586 1907 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
CCDC84-210ENST00000583842 CHGBP05060 677 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 FGRP09769 529 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 CYP2D6P10635 497 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 GJA8P48165 433 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
CCDC84-210ENST00000583842 SLC4A8Q2Y0W8 1093 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 Q3C1V9 767 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
CCDC84-210ENST00000583842 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
CCDC84-210ENST00000583842 USP6NLQ92738 828 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 NUDT12Q9BQG2 462 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 GABRQQ9UN88 632 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 SUPT16HQ9Y5B9 1047 aaKnown RBP13.29□□□□□ -0.28
CCDC84-210ENST00000583842 ROBO3Q96MS0 1386 aa13.29□□□□□ -0.28
CCDC84-210ENST00000583842 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
CCDC84-210ENST00000583842 IGHDP01880 384 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 APPP05067 770 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 AKR1B1P15121 316 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 ICA1Q05084 483 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 PDE4BQ07343 736 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 MORN1Q5T089 497 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 TSHZ3Q63HK5 1081 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 POTEEQ6S8J3 1075 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC84-210ENST00000583842 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
CCDC84-210ENST00000583842 LOC285556D6RIA3 1793 aa13.27□□□□□ -0.28
CCDC84-210ENST00000583842 HTTP42858 3142 aa13.27□□□□□ -0.28
CCDC84-210ENST00000583842 SGPL1O95470 568 aa13.27□□□□□ -0.29
CCDC84-210ENST00000583842 HOXC6P09630 235 aa13.27□□□□□ -0.29
CCDC84-210ENST00000583842 PCP11498 1178 aaKnown RBP13.27□□□□□ -0.29
CCDC84-210ENST00000583842 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms