RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 RBSNQ9H1K0 784 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 SUPT6HQ7KZ85 1726 aaKnown RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 IFNB1P01574 187 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 TYW5A2RUC4 315 aaKnown RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 VPS41P49754 854 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 PDZD8Q8NEN9 1154 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 BRD3Q15059 726 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 ANGPTL3Q9Y5C1 460 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 RRP9O43818 475 aaKnown RBP12.5□□□□□ -0.41
MSI2-217ENST00000583705 MGEA5O60502 916 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 SZRD1Q7Z422 152 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
MSI2-217ENST00000583705 IVLP07476 585 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 DLATP10515 647 aaKnown RBP12.49□□□□□ -0.41
MSI2-217ENST00000583705 KRT12Q99456 494 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 EFCC1Q9HA90 598 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 DDX21Q9NR30 783 aaKnown RBP eCLIP12.49□□□□□ -0.41
MSI2-217ENST00000583705 PARP2Q9UGN5 583 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 SUFUQ9UMX1 484 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 IGF1RP08069 1367 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 ATF7P17544 494 aaPredicted RBP12.49□□□□□ -0.41
MSI2-217ENST00000583705 MX2P20592 715 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 LIG4P49917 911 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 STAM2O75886 525 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 ECE1P42892 770 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 DISC1Q9NRI5 854 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
MSI2-217ENST00000583705 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
MSI2-217ENST00000583705 FIS1Q9Y3D6 152 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 ADCY7P51828 1080 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 ADAT2Q7Z6V5 191 aaKnown RBP12.49□□□□□ -0.41
MSI2-217ENST00000583705 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 GAS7O60861 476 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 KRT3P12035 628 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
MSI2-217ENST00000583705 CSGALNACT2Q8N6G5 542 aa12.49□□□□□ -0.41
MSI2-217ENST00000583705 EBAG9O00559 213 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ABCB4P21439 1286 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 TAOK1Q7L7X3 1001 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ANKRD42Q8N9B4 389 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 SUPT20HQ8NEM7 779 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 STAMQ92783 540 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 AS3MTQ9HBK9 375 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 STK38LQ9Y2H1 464 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 CEP104O60308 925 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 S100BP04271 92 aaPredicted RBP12.48□□□□□ -0.41
MSI2-217ENST00000583705 MAP7Q14244 749 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 MIER3Q7Z3K6 550 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 CXorf38Q8TB03 319 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 GDAP1Q8TB36 358 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ATP2A3Q93084 1043 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 PGBD1Q96JS3 809 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ADPGKQ9BRR6 497 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
MSI2-217ENST00000583705 RAPH1Q70E73 1250 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
MSI2-217ENST00000583705 N4BP2L2Q92802 583 aaPredicted RBP12.48□□□□□ -0.41
MSI2-217ENST00000583705 BAG5Q9UL15 447 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 AKR1B15C9JRZ8 316 aaPredicted RBP12.48□□□□□ -0.41
MSI2-217ENST00000583705 CPA1P15085 419 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 SPDL1Q96EA4 605 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 SLC7A5P2Q9GIP4 190 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 TTBK2Q6IQ55 1244 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 LCA5Q86VQ0 697 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 NUB1Q9Y5A7 615 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 ABCC5O15440 1437 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 LRRIQ4A6NIV6 560 aa12.48□□□□□ -0.41
MSI2-217ENST00000583705 RSRC2Q7L4I2 434 aaKnown RBP12.48□□□□□ -0.41
MSI2-217ENST00000583705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
MSI2-217ENST00000583705 IGSF3O75054 1194 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 BCRP11274 1271 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
MSI2-217ENST00000583705 TNNC2P02585 160 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 GBP1P32455 592 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 BLZF1Q9H2G9 400 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 PLCD1P51178 756 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
MSI2-217ENST00000583705 ATP6V1E2Q96A05 226 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms