RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 TATDN1Q6P1N9 297 aa19.75■□□□□ 0.75
SREBF1-221ENST00000583080 CUL9Q8IWT3 2517 aa19.74■□□□□ 0.75
SREBF1-221ENST00000583080 ATP8B2P98198 1209 aa19.74■□□□□ 0.75
SREBF1-221ENST00000583080 MDM2Q00987 491 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-221ENST00000583080 ACER1Q8TDN7 264 aa19.74■□□□□ 0.75
SREBF1-221ENST00000583080 CCDC8Q9H0W5 538 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-221ENST00000583080 CWC22Q9HCG8 908 aaKnown RBP19.74■□□□□ 0.75
SREBF1-221ENST00000583080 RABGAP1Q9Y3P9 1069 aa19.74■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L15C9J2P7 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L13C9JLJ4 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L11C9JVI0 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L18D6R9N7 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L22D6RA61 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L17D6RBQ6 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L19D6RCP7 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L20D6RJB6 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 VCAM1P19320 739 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP5P45974 858 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 USP17L24Q0WX57 530 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 RAB3GAP1Q15042 981 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 WDR78Q5VTH9 848 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 MAGEB6Q8N7X4 407 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 EAF2Q96CJ1 260 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-221ENST00000583080 MTMR10Q9NXD2 777 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 SERPINB13Q9UIV8 391 aa19.73■□□□□ 0.75
SREBF1-221ENST00000583080 ZKSCAN2Q63HK3 967 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 CATSPERGQ6ZRH7 1159 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 NAV1Q8NEY1 1877 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 EHD4Q9H223 541 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 ANTXR1Q9H6X2 564 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 BTBD7Q9P203 1132 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 STXBP5LQ9Y2K9 1186 aa19.72■□□□□ 0.75
SREBF1-221ENST00000583080 NOP58Q9Y2X3 529 aaKnown RBP19.72■□□□□ 0.75
SREBF1-221ENST00000583080 A0A0C4DFX4 3053 aa19.71■□□□□ 0.75
SREBF1-221ENST00000583080 IGSF3O75054 1194 aa19.71■□□□□ 0.75
SREBF1-221ENST00000583080 SHMT1P34896 483 aa19.71■□□□□ 0.75
SREBF1-221ENST00000583080 CCNA1P78396 465 aa19.71■□□□□ 0.75
SREBF1-221ENST00000583080 EDC3Q96F86 508 aaKnown RBP19.71■□□□□ 0.75
SREBF1-221ENST00000583080 KIAA1683Q9H0B3 1180 aa19.71■□□□□ 0.75
SREBF1-221ENST00000583080 SLC15A5A6NIM6 579 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 SPDYE16A6NNV3 312 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-221ENST00000583080 PTPREP23469 700 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 GUCY1A2P33402 732 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 USP14P54578 494 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 EVX2Q03828 476 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 ABCB5Q2M3G0 1257 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 CERKLQ49MI3 558 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-221ENST00000583080 MFSD14CQ5VZR4 134 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 NPLOC4Q8TAT6 608 aa19.7■□□□□ 0.74
SREBF1-221ENST00000583080 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
SREBF1-221ENST00000583080 PLCD1P51178 756 aa19.69■□□□□ 0.74
SREBF1-221ENST00000583080 GRB14Q14449 540 aa19.69■□□□□ 0.74
SREBF1-221ENST00000583080 LBX2Q6XYB7 198 aa19.69■□□□□ 0.74
SREBF1-221ENST00000583080 TRPV1Q8NER1 839 aa19.69■□□□□ 0.74
SREBF1-221ENST00000583080 SENP6Q9GZR1 1112 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-221ENST00000583080 RPAP3Q9H6T3 665 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-221ENST00000583080 DDX20Q9UHI6 824 aaKnown RBP19.69■□□□□ 0.74
SREBF1-221ENST00000583080 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
SREBF1-221ENST00000583080 LTBP2Q14767 1821 aa19.68■□□□□ 0.74
SREBF1-221ENST00000583080 ZNF236Q9UL36 1845 aa19.68■□□□□ 0.74
SREBF1-221ENST00000583080 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
SREBF1-221ENST00000583080 HOXC6P09630 235 aa19.68■□□□□ 0.74
SREBF1-221ENST00000583080 RLBP1P12271 317 aa19.68■□□□□ 0.74
SREBF1-221ENST00000583080 CYP2C19P33261 490 aa19.68■□□□□ 0.74
SREBF1-221ENST00000583080 ATN1P54259 1190 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-221ENST00000583080 RIOK1Q9BRS2 568 aaKnown RBP19.68■□□□□ 0.74
SREBF1-221ENST00000583080 CNGA1P29973 690 aa19.67■□□□□ 0.74
SREBF1-221ENST00000583080 SEPT2Q15019 361 aa19.67■□□□□ 0.74
SREBF1-221ENST00000583080 TTC6Q86TZ1 520 aa19.67■□□□□ 0.74
SREBF1-221ENST00000583080 CERS3Q8IU89 383 aa19.67■□□□□ 0.74
SREBF1-221ENST00000583080 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
SREBF1-221ENST00000583080 IVNS1ABPQ9Y6Y0 642 aa19.67■□□□□ 0.74
SREBF1-221ENST00000583080 IGHA2P01877 340 aa19.66■□□□□ 0.74
SREBF1-221ENST00000583080 CYBAP13498 195 aa19.66■□□□□ 0.74
SREBF1-221ENST00000583080 ATP2B2Q01814 1243 aa19.66■□□□□ 0.74
SREBF1-221ENST00000583080 MAP3K12Q12852 859 aa19.66■□□□□ 0.74
SREBF1-221ENST00000583080 LPAR1Q92633 364 aa19.66■□□□□ 0.74
SREBF1-221ENST00000583080 CABP5Q9NP86 173 aa19.66■□□□□ 0.74
SREBF1-221ENST00000583080 DNAH12Q6ZR08 3092 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 RLFQ13129 1914 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 A0A1W2PRG0 241 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 GABPAQ06546 454 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 AACSQ86V21 672 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 FTSJ3Q8IY81 847 aaKnown RBP19.65■□□□□ 0.74
SREBF1-221ENST00000583080 GUCD1Q96NT3 240 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 EXOC6BQ9Y2D4 811 aa19.65■□□□□ 0.74
SREBF1-221ENST00000583080 DNM1LO00429 736 aa19.64■□□□□ 0.73
SREBF1-221ENST00000583080 MSCO60682 206 aa19.64■□□□□ 0.73
SREBF1-221ENST00000583080 RTP1P59025 263 aa19.64■□□□□ 0.73
SREBF1-221ENST00000583080 CEP85Q6P2H3 762 aa19.64■□□□□ 0.73
SREBF1-221ENST00000583080 LBHD1Q9BQE6 289 aaPredicted RBP19.64■□□□□ 0.73
SREBF1-221ENST00000583080 MOV10L1Q9BXT6 1211 aaKnown RBP19.64■□□□□ 0.73
SREBF1-221ENST00000583080 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 POLR3DP05423 398 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-221ENST00000583080 ADORA2AP29274 412 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 KIAA1755Q5JYT7 1200 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-221ENST00000583080 ANO1Q5XXA6 986 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 CLEC10AQ8IUN9 316 aa19.63■□□□□ 0.73
SREBF1-221ENST00000583080 FAM161BQ96MY7 647 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms