RNA–Protein interactions for RNA: ENST00000582989.1

SPDYE4-203, Transcript of speedy/RINGO cell cycle regulator family member E4, humanhuman

TSL 1 (best)

Gene SPDYE4, Length 928 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4-203ENST00000582989 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
SPDYE4-203ENST00000582989 RNF208Q9H0X6 261 aa18.37■□□□□ 0.53
SPDYE4-203ENST00000582989 TXNRD2Q9NNW7 524 aa18.37■□□□□ 0.53
SPDYE4-203ENST00000582989 ATP8A2Q9NTI2 1148 aa18.37■□□□□ 0.53
SPDYE4-203ENST00000582989 BRCA2P51587 3418 aa18.37■□□□□ 0.53
SPDYE4-203ENST00000582989 CYP2D7A0A087X1C5 515 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 INHAP05111 366 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 GPRC5AQ8NFJ5 357 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 PAGR1Q9BTK6 254 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 PUS7LQ9H0K6 701 aaKnown RBP18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 UNC93B1Q9H1C4 597 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 SWAP70Q9UH65 585 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 SLC4A4Q9Y6R1 1079 aa18.36■□□□□ 0.53
SPDYE4-203ENST00000582989 GJB1P08034 283 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 VCAM1P19320 739 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 NKX2-3Q8TAU0 364 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 DDRGK1Q96HY6 314 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 RBPJLQ9UBG7 517 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 PLXNB2O15031 1838 aa18.35■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 SMIM22K7EJ46 135 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 GJA8P48165 433 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 AMOTL1Q8IY63 956 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
SPDYE4-203ENST00000582989 USP17L12C9JPN9 530 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 USP17L21D6R901 530 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 ERVK-9P63128 1117 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 ERVK-24P63145 666 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 C12orf60Q5U649 245 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 POTEEQ6S8J3 1075 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
SPDYE4-203ENST00000582989 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 AKR1B1P15121 316 aa18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 Q3C1V9 767 aa18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 CATSPERGQ6ZRH7 1159 aa18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 CLEC10AQ8IUN9 316 aa18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 CCAR1Q8IX12 1150 aaKnown RBP18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 U2AF1L4Q8WU68 220 aaKnown RBP18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 PORCNQ9H237 461 aa18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 RPAP3Q9H6T3 665 aaPredicted RBP18.32■□□□□ 0.52
SPDYE4-203ENST00000582989 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 HMGCRP04035 888 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 MAPK4P31152 587 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 CDK8P49336 464 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 CTR9Q6PD62 1173 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 C16orf86Q6ZW13 317 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 APPBP2Q92624 585 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
SPDYE4-203ENST00000582989 CNMDO75829 334 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 CYP2B6P20813 491 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 ICA1Q05084 483 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 SOCS4Q8WXH5 440 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
SPDYE4-203ENST00000582989 CEP290O15078 2479 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 SPDYE16A6NNV3 312 aaPredicted RBP18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 ERC2O15083 957 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 SGPL1O95470 568 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 TRIM32Q13049 653 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 GPR142Q7Z601 462 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 TRIB2Q92519 343 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 ARHGEF10LQ9HCE6 1279 aa18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
SPDYE4-203ENST00000582989 GSG1L2A8MUP6 293 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 M0R2C6 588 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 GPAA1O43292 621 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 MX1P20591 662 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 CCNA1P78396 465 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 KIAA1755Q5JYT7 1200 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 LBX2Q6XYB7 198 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 PLEKHH3Q7Z736 793 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 BTBD7Q9P203 1132 aa18.28■□□□□ 0.52
SPDYE4-203ENST00000582989 LRRFIP1Q32MZ4 808 aaKnown RBP18.27■□□□□ 0.52
SPDYE4-203ENST00000582989 WDR78Q5VTH9 848 aa18.27■□□□□ 0.52
SPDYE4-203ENST00000582989 UBE2Q1Q7Z7E8 422 aa18.27■□□□□ 0.52
SPDYE4-203ENST00000582989 SIAH1Q8IUQ4 282 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms