RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 PORCNQ9H237 461 aa9.44□□□□□ -0.9
CCDC47-205ENST00000582331 CWC22Q9HCG8 908 aaKnown RBP9.44□□□□□ -0.9
CCDC47-205ENST00000582331 HERC5Q9UII4 1024 aaKnown RBP9.44□□□□□ -0.9
CCDC47-205ENST00000582331 PTPRCP08575 1304 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 PDS5AQ29RF7 1337 aaKnown RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 MSCO60682 206 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 GLRX3O76003 335 aaKnown RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 ASNSP08243 561 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 FOSL2P15408 326 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 CNGA1P29973 690 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 ADORA1P30542 326 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 IL15P40933 162 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 RTP1P59025 263 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 GSTO1P78417 241 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 SMAD3P84022 425 aaKnown RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 MECOMQ03112 1051 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 RASGRF1Q13972 1273 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 GTF3C2Q8WUA4 911 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 LPAR1Q92633 364 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 PAGR1Q9BTK6 254 aa9.43□□□□□ -0.9
CCDC47-205ENST00000582331 DDX20Q9UHI6 824 aaKnown RBP9.43□□□□□ -0.9
CCDC47-205ENST00000582331 USP17L10C9JJH3 530 aa9.42□□□□□ -0.9
CCDC47-205ENST00000582331 DNM1LO00429 736 aa9.42□□□□□ -0.9
CCDC47-205ENST00000582331 TIMM10P62072 90 aa9.42□□□□□ -0.9
CCDC47-205ENST00000582331 C9orf50Q5SZB4 431 aa9.42□□□□□ -0.9
CCDC47-205ENST00000582331 TTYH1Q9H313 450 aaPredicted RBP9.42□□□□□ -0.9
CCDC47-205ENST00000582331 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
CCDC47-205ENST00000582331 ATP11BQ9Y2G3 1177 aa9.42□□□□□ -0.9
CCDC47-205ENST00000582331 ATAD5Q96QE3 1844 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 TNFRSF10AO00220 468 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 CCNA1P78396 465 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 ATP2B2Q01814 1243 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 SLC39A5Q6ZMH5 540 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 TEX11Q8IYF3 940 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 ARRDC4Q8NCT1 418 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 ZNF384Q8TF68 577 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 BADQ92934 168 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 DHX36Q9H2U1 1008 aaKnown RBP9.41□□□□□ -0.9
CCDC47-205ENST00000582331 PRDM5Q9NQX1 630 aaPredicted RBP9.41□□□□□ -0.9
CCDC47-205ENST00000582331 GINM1Q9NU53 330 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
CCDC47-205ENST00000582331 FAM205CA6NFA0 338 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 SLC15A5A6NIM6 579 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 UBTFL1P0CB47 393 aaPredicted RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 PTPREP23469 700 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 JAG1P78504 1218 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 MVPQ14764 893 aaKnown RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 GJC2Q5T442 439 aaPredicted RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 WDR78Q5VTH9 848 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 FOXP4Q8IVH2 680 aaPredicted RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 NOL10Q9BSC4 688 aaKnown RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 PA2G4Q9UQ80 394 aaKnown RBP9.4□□□□□ -0.9
CCDC47-205ENST00000582331 AKAP2Q9Y2D5 859 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
CCDC47-205ENST00000582331 TMEM265A0A087WTH1 108 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 A0A1B0GUL7 405 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 KBTBD13C9JR72 458 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 HOXC6P09630 235 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 CYP2C19P33261 490 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
CCDC47-205ENST00000582331 NPLOC4Q8TAT6 608 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 SH3RF3Q8TEJ3 882 aaPredicted RBP9.39□□□□□ -0.91
CCDC47-205ENST00000582331 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 EMILIN3Q9NT22 766 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
CCDC47-205ENST00000582331 RAI14Q9P0K7 980 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 IVNS1ABPQ9Y6Y0 642 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 LTBP2Q14767 1821 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 FRMPD3Q5JV73 1810 aa9.39□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L15C9J2P7 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L13C9JLJ4 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L11C9JVI0 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L18D6R9N7 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L22D6RA61 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L17D6RBQ6 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L19D6RCP7 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L20D6RJB6 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 CNMDO75829 334 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 GDF11O95390 407 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 BAG3O95817 575 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 USP17L24Q0WX57 530 aa9.38□□□□□ -0.91
CCDC47-205ENST00000582331 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-205ENST00000582331 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms