RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 SAGE1Q9NXZ1 904 aa19.52■□□□□ 0.72
RNF43-206ENST00000582293 HSPA8P11142 646 aaKnown RBP19.51■□□□□ 0.71
RNF43-206ENST00000582293 HMGCS2P54868 508 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 BACE1P56817 501 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 MAP4K1Q92918 833 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 EMILIN3Q9NT22 766 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 TAF6LQ9Y6J9 622 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 PLIN4Q96Q06 1357 aa19.51■□□□□ 0.71
RNF43-206ENST00000582293 USP17L10C9JJH3 530 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 ORC4O43929 436 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 PDE4BQ07343 736 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 FAM47AQ5JRC9 791 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 TREML2Q5T2D2 321 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 ANKRD23Q86SG2 305 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 STAG1Q8WVM7 1258 aa19.5■□□□□ 0.71
RNF43-206ENST00000582293 KIAA1755Q5JYT7 1200 aa19.49■□□□□ 0.71
RNF43-206ENST00000582293 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
RNF43-206ENST00000582293 NEDD1Q8NHV4 660 aa19.49■□□□□ 0.71
RNF43-206ENST00000582293 NEDD4P46934 1319 aa19.49■□□□□ 0.71
RNF43-206ENST00000582293 PDHXO00330 501 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 ZNF213O14771 459 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 CA12O43570 354 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 SLC3A2P08195 630 aaKnown RBP19.48■□□□□ 0.71
RNF43-206ENST00000582293 CYP21A2P08686 494 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 TFAP4Q01664 338 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 ICA1Q05084 483 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 CRHR2Q13324 411 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 AKNAD1Q5T1N1 836 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 FASTKD5Q7L8L6 764 aaKnown RBP19.48■□□□□ 0.71
RNF43-206ENST00000582293 ZNF444Q8N0Y2 327 aaPredicted RBP19.48■□□□□ 0.71
RNF43-206ENST00000582293 PROCA1Q8NCQ7 364 aaPredicted RBP19.48■□□□□ 0.71
RNF43-206ENST00000582293 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 BEGAINQ9BUH8 593 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 KIAA1683Q9H0B3 1180 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 ZCCHC17Q9NP64 241 aaKnown RBP19.48■□□□□ 0.71
RNF43-206ENST00000582293 AGTPBP1Q9UPW5 1226 aa19.48■□□□□ 0.71
RNF43-206ENST00000582293 C19orf81C9J6K1 198 aa19.47■□□□□ 0.71
RNF43-206ENST00000582293 ALDH1A1P00352 501 aa19.47■□□□□ 0.71
RNF43-206ENST00000582293 EEF2P13639 858 aaKnown RBP19.47■□□□□ 0.71
RNF43-206ENST00000582293 ZYXQ15942 572 aaKnown RBP19.47■□□□□ 0.71
RNF43-206ENST00000582293 ZNF287Q9HBT7 754 aa19.47■□□□□ 0.71
RNF43-206ENST00000582293 IL17RBQ9NRM6 502 aa19.47■□□□□ 0.71
RNF43-206ENST00000582293 CTNNA3Q9UI47 895 aa19.47■□□□□ 0.71
RNF43-206ENST00000582293 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
RNF43-206ENST00000582293 ADGRA2Q96PE1 1338 aa19.47■□□□□ 0.71
RNF43-206ENST00000582293 NMT2O60551 498 aa19.46■□□□□ 0.71
RNF43-206ENST00000582293 OTUD7BQ6GQQ9 843 aa19.46■□□□□ 0.71
RNF43-206ENST00000582293 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
RNF43-206ENST00000582293 CEP95Q96GE4 821 aa19.46■□□□□ 0.71
RNF43-206ENST00000582293 KANSL2Q9H9L4 492 aa19.46■□□□□ 0.71
RNF43-206ENST00000582293 TMX2Q9Y320 296 aa19.46■□□□□ 0.71
RNF43-206ENST00000582293 U3KPZ7 1027 aaPredicted RBP19.46■□□□□ 0.71
RNF43-206ENST00000582293 NOVP48745 357 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 CTCFP49711 727 aaPredicted RBP19.45■□□□□ 0.7
RNF43-206ENST00000582293 LBX1P52954 281 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
RNF43-206ENST00000582293 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
RNF43-206ENST00000582293 STOX1Q6ZVD7 989 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 ANO2Q9NQ90 1003 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 MTMR4Q9NYA4 1195 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 NYAP2Q9P242 653 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 SLC45A1Q9Y2W3 748 aa19.45■□□□□ 0.7
RNF43-206ENST00000582293 RANBP6O60518 1105 aaKnown RBP19.44■□□□□ 0.7
RNF43-206ENST00000582293 TSPY3P0CV98 308 aa19.44■□□□□ 0.7
RNF43-206ENST00000582293 TSPY8P0CW00 308 aa19.44■□□□□ 0.7
RNF43-206ENST00000582293 CYP2C8P10632 490 aa19.44■□□□□ 0.7
RNF43-206ENST00000582293 PCP11498 1178 aaKnown RBP19.44■□□□□ 0.7
RNF43-206ENST00000582293 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
RNF43-206ENST00000582293 RRP12Q5JTH9 1297 aaKnown RBP19.44■□□□□ 0.7
RNF43-206ENST00000582293 MFSD6Q6ZSS7 791 aa19.44■□□□□ 0.7
RNF43-206ENST00000582293 FEZ1Q99689 392 aa19.44■□□□□ 0.7
RNF43-206ENST00000582293 TSPY2A6NKD2 308 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 VCAM1P19320 739 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
RNF43-206ENST00000582293 CAP1Q01518 475 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 COL9A3Q14050 684 aaPredicted RBP19.43■□□□□ 0.7
RNF43-206ENST00000582293 POTEEQ6S8J3 1075 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 MKL1Q969V6 931 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 ARHGEF10LQ9HCE6 1279 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 TMOD4Q9NZQ9 345 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 MYH4Q9Y623 1939 aa19.43■□□□□ 0.7
RNF43-206ENST00000582293 B4E1Z4 1266 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 GPR25O00155 361 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 TLR2O60603 784 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 USP14P54578 494 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 NOM1Q5C9Z4 860 aaKnown RBP19.42■□□□□ 0.7
RNF43-206ENST00000582293 CASC1Q6TDU7 716 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 KIAA1211Q6ZU35 1233 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 RNF41Q9H4P4 317 aaPredicted RBP19.42■□□□□ 0.7
RNF43-206ENST00000582293 VCPKMTQ9H867 229 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 TOMM22Q9NS69 142 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
RNF43-206ENST00000582293 RLFQ13129 1914 aa19.41■□□□□ 0.7
RNF43-206ENST00000582293 SLC27A2O14975 620 aa19.41■□□□□ 0.7
RNF43-206ENST00000582293 ATP2B2Q01814 1243 aa19.41■□□□□ 0.7
RNF43-206ENST00000582293 RCSD1Q6JBY9 416 aa19.41■□□□□ 0.7
RNF43-206ENST00000582293 C17orf99Q6UX52 265 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms